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Eike Steinig
Eike Steinig
The Peter Doherty Institute for Infection and Immunity, University of Melbourne
Verified email at unimelb.edu.au - Homepage
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Cited by
Cited by
Year
netview p: a network visualization tool to unravel complex population structure using genome‐wide SNPs
EJ Steinig, M Neuditschko, MS Khatkar, HW Raadsma, KR Zenger
Molecular Ecology Resources 16 (1), 216-227, 2016
1122016
Evolution and global transmission of a multidrug-resistant, community-associated methicillin-resistant Staphylococcus aureus lineage from the Indian subcontinent
EJ Steinig, S Duchene, DA Robinson, S Monecke, M Yokoyama, ...
mBio 10 (6), e01105-19, 2019
100*2019
Effects of growth phase and nitrogen starvation on expression of fatty acid desaturases and fatty acid composition of Isochrysis aff. galbana (TISO)
R Huerlimann, EJ Steinig, H Loxton, KR Zenger, DR Jerry, K Heimann
Gene 545 (1), 36-44, 2014
372014
The effect of nitrogen limitation on acetyl-CoA carboxylase expression and fatty acid content in Chromera velia and Isochrysis aff. galbana (TISO)
R Huerlimann, EJ Steinig, H Loxton, KR Zenger, DR Jerry, K Heimann
Gene 543 (2), 204-211, 2014
372014
Global scale dissemination of ST93: a divergent Staphylococcus aureus epidemic lineage that has recently emerged from remote Northern Australia
SJ van Hal, EJ Steinig, P Andersson, MTG Holden, SR Harris, GR Nimmo, ...
Frontiers in Microbiology 9, 1453, 2018
33*2018
Mpox diagnostics: Review of current and emerging technologies
CK Lim, J Roberts, M Moso, KC Liew, ML Taouk, E Williams, T Tran, ...
Journal of medical virology 95 (1), e28429, 2023
282023
Single-molecule sequencing reveals the molecular basis of multidrug-resistance in ST772 methicillin-resistant Staphylococcus aureus
EJ Steinig, P Andersson, SR Harris, DS Sarovich, A Manoharan, ...
BMC Genomics 16 (1), 388, 2015
282015
Taking the next-gen step: Comprehensive antimicrobial resistance detection from Burkholderia pseudomallei
DE Madden, JR Webb, EJ Steinig, BJ Currie, EP Price, DS Sarovich
EBioMedicine 63, 2021
242021
Development and validation of a RAD-Seq target-capture based genotyping assay for routine application in advanced black tiger shrimp (Penaeus monodon) breeding programs
JL Guppy, DB Jones, SR Kjeldsen, A Le Port, MS Khatkar, NM Wade, ...
BMC Genomics 21 (541), 2020
232020
Nanoq: ultra-fast quality control for nanopore reads
E Steinig, L Coin
Journal of Open Source Software 7 (69), 2991, 2022
202022
Exploring the evolution and epidemiology of European CC1-MRSA-IV: tracking a multidrug-resistant community-associated meticillin-resistant Staphylococcus aureus clone
MR Earls, EJ Steinig, S Monecke, JA Samaniego Castruita, A Simbeck, ...
Microbial genomics 7 (7), 000601, 2021
172021
Identification of key contributors in complex population structures
M Neuditschko, HW Raadsma, MS Khatkar, E Jonas, EJ Steinig, C Flury, ...
PLOS ONE 12 (5), e0177638, 2017
152017
Phylodynamic signatures in the emergence of community-associated MRSA
E Steinig, I Aglua, S Duchene, MT Meehan, M Yoannes, C Firth, ...
Proceedings of the National Academy of Sciences 119 (45), e2204993119, 2022
112022
Staphylococcus aureus from patients with chronic rhinosinusitis show minimal genetic association between polyp and non-polyp phenotypes
JJ Bardy, DS Sarovich, EP Price, E Steinig, S Tong, A Drilling, J Ou, ...
BMC Ear, Nose and Throat Disorders 18 (1), 16, 2018
112018
Phylodynamic inference of bacterial outbreak parameters using nanopore sequencing
E Steinig, S Duchêne, I Aglua, A Greenhill, R Ford, M Yoannes, ...
Molecular Biology and Evolution 39 (3), msac040, 2022
9*2022
Non-SARS-CoV-2 respiratory viral detection and whole genome sequencing from COVID-19 rapid antigen test devices: a laboratory evaluation study
MA Moso*, G Taiaroa*, E Steinig*, M Zhanduisenov, G Butel-Simoes, ...
The Lancet Microbe, 2024
12024
Intra- and interhost genomic diversity of monkeypox virus
ML Taouk, E Steinig, G Taiaroa, I Savic, T Tran, N Higgins, S Tran, A Lee, ...
Journal of Medical Virology 95 (1), e29029, 2023
12023
Genomic neighbor typing for bacterial outbreak surveillance
E Steinig, M Pitt, I Aglua, A Suttie, A Greenhill, C Heather, C Firth, S Smith, ...
bioRxiv, 2022
12022
Emergence and clonal expansion of a qacA-harbouring sequence type 45 lineage of methicillin-resistant Staphylococcus aureus
Y Nong, E Steinig, GL Pollock, G Taiaroa, GP Carter, IR Monk, S Pang, ...
Communications biology 7 (1), 349, 2024
2024
Benchmarking reveals superiority of deep learning variant callers on bacterial nanopore sequence data
MB Hall, RR Wick, LM Judd, ANT Nguyen, EJ Steinig, O Xie, MR Davies, ...
bioRxiv, 2024.03. 15.585313, 2024
2024
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