Pierre-Alexandre GAGNAIRE
Pierre-Alexandre GAGNAIRE
CNRS, Institut des Sciences de l'Evolution de Montpellier (ISEM)
Verified email at umontpellier.fr
Title
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Year
European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation
M Tine, H Kuhl, PA Gagnaire, B Louro, E Desmarais, RST Martins, ...
Nature communications 5 (1), 1-10, 2014
3482014
THE GENETIC ARCHITECTURE OF REPRODUCTIVE ISOLATION DURING SPECIATION‐WITH‐GENE‐FLOW IN LAKE WHITEFISH SPECIES PAIRS ASSESSED BY RAD SEQUENCING
PA Gagnaire, SA Pavey, E Normandeau, L Bernatchez
Evolution 67 (9), 2483–2497, 2013
1992013
Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era
PA Gagnaire, T Broquet, D Aurelle, F Viard, A Souissi, F Bonhomme, ...
Evolutionary applications 8 (8), 769-786, 2015
1872015
The Genetic Consequences of Spatially Varying Selection in the Panmictic American Eel (Anguilla rostrata)
PA Gagnaire, E Normandeau, C Côté, M Møller Hansen, L Bernatchez
Genetics 190 (2), 725-736, 2012
1372012
The geography of introgression in a patchy environment and the thorn in the side of ecological speciation
N Bierne, PA Gagnaire, P David
Current Zoology 59 (1), 72-86, 2013
1202013
Population genetics of the American eel (Anguilla rostrata): FST= 0 and North Atlantic Oscillation effects on demographic fluctuations of a panmictic species
CL Côté, PA Gagnaire, V Bourret, G Verreault, M Castonguay, ...
Molecular ecology 22 (7), 1763–1776, 2013
1092013
Mapping phenotypic, expression and transmission ratio distortion QTL using RAD markers in the Lake Whitefish (Coregonus clupeaformis)
PA Gagnaire, E Normandeau, SA Pavey, L Bernatchez
Molecular ecology 22 (11), 3036–3048, 2013
1062013
Parallel genetic divergence among coastal–marine ecotype pairs of European anchovy explained by differential introgression after secondary contact
A Le Moan, PA Gagnaire, F Bonhomme
Molecular ecology 25 (13), 3187-3202, 2016
1012016
Modeling the Multiple Facets of Speciation-with-Gene-Flow toward Inferring the Divergence History of Lake Whitefish Species Pairs (Coregonus clupeaformis)
C Rougeux, L Bernatchez, PA Gagnaire
Genome Biology and Evolution 9 (8), 2057–2074, 2017
932017
Inferring the demographic history underlying parallel genomic divergence among pairs of parasitic and nonparasitic lamprey ecotypes
Q Rougemont, PA Gagnaire, C Perrier, C Genthon, AL Besnard, S Launey, ...
Molecular ecology 26 (1), 142–162, 2017
932017
Comparative genomics reveals adaptive protein evolution and a possible cytonuclear incompatibility between European and American eels
PA Gagnaire, E Normandeau, L Bernatchez
Molecular Biology and Evolution 29 (10), 2909–2919, 2012
802012
RAD-QTL mapping reveals both genome-level parallelism and different genetic architecture underlying the evolution of body shape in lake whitefish (Coregonus clupeaformis …
M Laporte, SM Rogers, AM Dion-Côté, E Normandeau, PA Gagnaire, ...
G3: Genes, Genomes, Genetics 5 (7), 1481-1491, 2015
772015
Detecting polygenic selection in marine populations by combining population genomics and quantitative genetics approaches
PA Gagnaire, OE Gaggiotti
Current Zoology 62 (6), 603-616, 2016
662016
The origin and remolding of genomic islands of differentiation in the European sea bass
M Duranton, F Allal, C Fraïsse, N Bierne, F Bonhomme, PA Gagnaire
Nature communications 9 (1), 1-11, 2018
642018
Natural selection influences AFLP intraspecific genetic variability and introgression patterns in Atlantic eels
PA Gagnaire, V Albert, B Jónsson, L Bernatchez
Molecular Ecology 18 (8), 1678-1691, 2009
642009
WITHIN‐POPULATION STRUCTURE HIGHLIGHTED BY DIFFERENTIAL INTROGRESSION ACROSS SEMIPERMEABLE BARRIERS TO GENE FLOW IN ANGUILLA MARMORATA
PA Gagnaire, Y Minegishi, S Zenboudji, P Valade, J Aoyama, P Berrebi
Evolution 65 (12), 3413–3427, 2011
552011
Population genomic footprints of fine‐scale differentiation between habitats in Mediterranean blue tits
M Szulkin, PA Gagnaire, N Bierne, A Charmantier
Molecular ecology 25 (2), 542-558, 2016
532016
Analysis of Genome-Wide Differentiation between Native and Introduced Populations of the Cupped Oysters Crassostrea gigas and Crassostrea angulata
PA Gagnaire, JB Lamy, F Cornette, S Heurtebise, L Dégremont, ...
Genome biology and evolution 10 (9), 2518-2534, 2018
442018
The European sea bass: a key marine fish model in the wild and in aquaculture
M Vandeputte, PA Gagnaire, F Allal
Animal genetics 50 (3), 195-206, 2019
432019
Assessment of cryptic species diversity within blooms and cyst bank of the Alexandrium tamarense complex (Dinophyceae) in a Mediterranean lagoon facilitated by semi-multiplex PCR
B Genovesi, MS Shin-Grzebyk, D Grzebyk, M Laabir, PA Gagnaire, ...
Journal of Plankton Research 33 (3), 405-414, 2011
422011
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