Tina Toni
TitleCited byYear
Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems
T Toni, D Welch, N Strelkowa, A Ipsen, MPH Stumpf
Journal of the Royal Society Interface 6 (31), 187-202, 2008
9652008
Simulation-based model selection for dynamical systems in systems and population biology
T Toni, MPH Stumpf
Bioinformatics 26 (1), 104-110, 2009
2192009
Managing membrane stress: the phage shock protein (Psp) response, from molecular mechanisms to physiology
N Joly, C Engl, G Jovanovic, M Huvet, T Toni, X Sheng, MPH Stumpf, ...
FEMS microbiology reviews 34 (5), 797-827, 2010
1692010
ABC-SysBio—approximate Bayesian computation in Python with GPU support
J Liepe, C Barnes, E Cule, K Erguler, P Kirk, T Toni, MPH Stumpf
Bioinformatics 26 (14), 1797-1799, 2010
1442010
A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation
J Liepe, P Kirk, S Filippi, T Toni, CP Barnes, MPH Stumpf
Nature protocols 9 (2), 439, 2014
1262014
The evolution of the phage shock protein response system: interplay between protein function, genomic organization, and system function
M Huvet, T Toni, X Sheng, T Thorne, G Jovanovic, C Engl, M Buck, ...
Molecular biology and evolution 28 (3), 1141-1155, 2010
502010
The ABC of reverse engineering biological signalling systems
M Secrier, T Toni, MPH Stumpf
Molecular BioSystems 5 (12), 1925-1935, 2009
462009
Combined model of intrinsic and extrinsic variability for computational network design with application to synthetic biology
T Toni, B Tidor
PLoS computational biology 9 (3), e1002960, 2013
452013
Model selection in systems biology depends on experimental design
D Silk, PDW Kirk, CP Barnes, T Toni, MPH Stumpf
PLoS computational biology 10 (6), e1003650, 2014
382014
Parameter inference for biochemical systems that undergo a Hopf bifurcation
PDW Kirk, T Toni, MPH Stumpf
Biophysical journal 95 (2), 540-549, 2008
292008
Designing attractive models via automated identification of chaotic and oscillatory dynamical regimes
D Silk, PDW Kirk, CP Barnes, T Toni, A Rose, S Moon, MJ Dallman, ...
Nature communications 2, 489, 2011
272011
Elucidating the in vivo phosphorylation dynamics of the ERK MAP kinase using quantitative proteomics data and Bayesian model selection
T Toni, Y Ozaki, P Kirk, S Kuroda, MPH Stumpf
Molecular BioSystems 8 (7), 1921-1929, 2012
242012
Parameter inference and model selection in signaling pathway models
T Toni, MPH Stumpf
Computational Biology, 283-295, 2010
172010
From qualitative data to quantitative models: analysis of the phage shock protein stress response in Escherichia coli
T Toni, G Jovanovic, M Huvet, M Buck, MPH Stumpf
BMC systems biology 5 (1), 69, 2011
152011
Model-based evolutionary analysis: the natural history of phage-shock stress response
M Huvet, T Toni, H Tan, G Jovanovic, C Engl, M Buck, MPH Stumpf
Biochemical Society Transactions 37 (4), 762-767, 2009
132009
Systems pharmacology of the NGF signaling through p75 and TrkA receptors
T Toni, P Dua, PH Van der Graaf
CPT: pharmacometrics & systems pharmacology 3 (12), 1-8, 2014
102014
Approximate Bayesian computation for parameter inference and model selection in systems biology
T Toni
Imperial College London, 2010
52010
Tutorial on ABC rejection and ABC SMC for parameter estimation and model selection
T Toni, MPH Stumpf
arXiv preprint arXiv:0910.4472, 2009
22009
Inference of Signalling Pathway Models
T Toni, J Liepe, MPH Stumpf
Handbook of Statistical Systems Biology, 419, 2011
2011
ABC SMC for parameter estimation and model selection with applications in systems biology
T Toni
Nature Publishing Group, 2011
2011
The system can't perform the operation now. Try again later.
Articles 1–20