William Stafford Noble

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	All	Since 2016
Citations	63049	30991
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Co-authors

Timothy BaileyUniversity of Nevada, RenoVerified email at unr.edu
Jeffrey A. BilmesProfessor of Electrical Engineering and Computer Science, University of Washington SeattleVerified email at uw.edu
Michael MacCossProfessor of Genome Sciences, University of WashingtonVerified email at uw.edu
Jason WestonFacebookVerified email at fb.com
Christina LeslieMemorial Sloan-Kettering Cancer CenterVerified email at cbio.mskcc.org
Jay ShendureProfessor of Genome Sciences, University of WashingtonVerified email at uw.edu
Charles E. GrantUniversity of WashingtonVerified email at uw.edu
Zhiping WengDirector, Professor of Program in Bioinformatics and Integrative Biology, University ofVerified email at umassmed.edu
Lukas KällProfessor, KTH Royal Institute of Technology, Science for Life LaboratoryVerified email at kth.se
Eleazar EskinUniversity of California, Los AngelesVerified email at cs.ucla.edu
Zhijun Duan, PhDInstitute for Stem Cell & Regenerative Medicine, Division of Hematology, Department of MedicineVerified email at uw.edu
Paul PavlidisProfessor of Psychiatry, University of British ColumbiaVerified email at msl.ubc.ca
Ferhat AyLa Jolla Institute for ImmunologyVerified email at lji.org
Maxwell W LibbrechtAssistant Professor, Computing Science, Simon Fraser UniversityVerified email at sfu.ca
Michael M. HoffmanScientist, Princess Margaret Cancer Centre/Associate Professor, University of TorontoVerified email at utoronto.ca
Nello CristianiniUniversity of BristolVerified email at bristol.ac.uk
Tony BlauUniversity of WashingtonVerified email at uw.edu
Jean-Philippe VertGoogle Brain / Mines ParisTechVerified email at mines-paristech.fr
Wenxiu MaAssistant Professor, University of California, RiversideVerified email at ucr.edu
Ewan BirneyDirector, EMBL-EBIVerified email at ebi.ac.uk

William Stafford Noble

Professor of Genome Sciences, University of Washington

Verified email at uw.edu - Homepage

computational biology machine learning proteomics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57-74, 2012	11378*	2012
MEME Suite: tools for motif discovery and searching TL Bailey, M Boden, FA Buske, M Frith, CE Grant, L Clementi, J Ren, ... Nucleic acids research 37 (suppl_2), W202-W208, 2009	5527	2009
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project ENCODE Project Consortium nature 447 (7146), 799, 2007	5203	2007
Knowledge-based analysis of microarray gene expression data by using support vector machines MPS Brown, WN Grundy, D Lin, N Cristianini, CW Sugnet, TS Furey, ... Proceedings of the National Academy of Sciences 97 (1), 262-267, 2000	3016	2000
FIMO: scanning for occurrences of a given motif CE Grant, TL Bailey, WS Noble Bioinformatics 27 (7), 1017-1018, 2011	2124	2011
Assessing computational tools for the discovery of transcription factor binding sites M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ... Nature biotechnology 23 (1), 137-144, 2005	1501	2005
Semi-supervised learning for peptide identification from shotgun proteomics datasets L Käll, JD Canterbury, J Weston, WS Noble, MJ MacCoss Nature methods 4 (11), 923-925, 2007	1403	2007
The spectrum kernel: A string kernel for SVM protein classification C Leslie, E Eskin, WS Noble Biocomputing 2002, 564-575, 2001	1346	2001
Quantifying similarity between motifs S Gupta, JA Stamatoyannopoulos, TL Bailey, WS Noble Genome biology 8 (2), R24, 2007	1254	2007
What is a support vector machine? WS Noble Nature biotechnology 24 (12), 1565-1567, 2006	1128	2006
A three-dimensional model of the yeast genome Z Duan, M Andronescu, K Schutz, S McIlwain, YJ Kim, C Lee, J Shendure, ... Nature 465 (7296), 363-367, 2010	915	2010
Machine learning applications in genetics and genomics MW Libbrecht, WS Noble Nature Reviews Genetics 16 (6), 321-332, 2015	910	2015
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors J Wang, J Zhuang, S Iyer, XY Lin, TW Whitfield, MC Greven, BG Pierce, ... Genome research 22 (9), 1798-1812, 2012	825	2012
A statistical framework for genomic data fusion GRG Lanckriet, T De Bie, N Cristianini, MI Jordan, WS Noble Bioinformatics 20 (16), 2626-2635, 2004	806	2004
The MEME suite TL Bailey, J Johnson, CE Grant, WS Noble Nucleic acids research 43 (W1), W39-W49, 2015	751	2015
Mismatch string kernels for discriminative protein classification CS Leslie, E Eskin, A Cohen, J Weston, WS Noble Bioinformatics 20 (4), 467-476, 2004	734	2004
Kernel methods for predicting protein–protein interactions A Ben-Hur, WS Noble Bioinformatics 21 (suppl_1), i38-i46, 2005	715	2005
Global mapping of protein-DNA interactions in vivo by digital genomic footprinting JR Hesselberth, X Chen, Z Zhang, PJ Sabo, R Sandstrom, AP Reynolds, ... Nature methods 6 (4), 283-289, 2009	615	2009
Assigning significance to peptides identified by tandem mass spectrometry using decoy databases L Käll, JD Storey, MJ MacCoss, WS Noble Journal of proteome research 7 (01), 29-34, 2008	593	2008
Unsupervised pattern discovery in human chromatin structure through genomic segmentation MM Hoffman, OJ Buske, J Wang, Z Weng, JA Bilmes, WS Noble Nature methods 9 (5), 473, 2012	545	2012

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