William Stafford Noble

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Timothy BaileyUniversity of Nevada, RenoVerified email at unr.edu
Jeffrey A. BilmesProfessor of Electrical Engineering and Computer Science, University of Washington SeattleVerified email at uw.edu
Michael MacCossProfessor of Genome Sciences, University of WashingtonVerified email at uw.edu
Jason WestonFacebookVerified email at fb.com
Jay ShendureProfessor of Genome Sciences, University of WashingtonVerified email at uw.edu
Christina LeslieMemorial Sloan-Kettering Cancer CenterVerified email at cbio.mskcc.org
Charles E. GrantUniversity of WashingtonVerified email at uw.edu
Lukas KällProfessor, KTH Royal Institute of Technology, Science for Life LaboratoryVerified email at kth.se
Eleazar EskinUniversity of California, Los AngelesVerified email at cs.ucla.edu
Zhijun Duan, PhDInstitute for Stem Cell & Regenerative Medicine, Division of Hematology, Department of MedicineVerified email at uw.edu
Paul PavlidisProfessor of Psychiatry, University of British ColumbiaVerified email at msl.ubc.ca
Ferhat AyAssociate Professor, La Jolla Institute for ImmunologyVerified email at lji.org
Zhiping WengDirector, Professor of Program in Bioinformatics and Integrative Biology, University ofVerified email at umassmed.edu
Christine DistecheUniversity of WashingtonVerified email at uw.edu
Michael M. HoffmanSenior Scientist, University Health Network/Associate Professor, University of TorontoVerified email at utoronto.ca
Maxwell W LibbrechtAssistant Professor, Computing Science, Simon Fraser UniversityVerified email at sfu.ca
Jean-Philippe VertGoogle Brain / Mines ParisTechVerified email at mines-paristech.fr
Nello CristianiniUniversity of BristolVerified email at bristol.ac.uk
Tony BlauUniversity of WashingtonVerified email at uw.edu
Wenxiu MaUniversity of California, RiversideVerified email at ucr.edu

William Stafford Noble

Professor of Genome Sciences, University of Washington

Verified email at uw.edu - Homepage

computational biology machine learning proteomics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012	12212	2012
MEME Suite: tools for motif discovery and searching TL Bailey, M Boden, FA Buske, M Frith, CE Grant, L Clementi, J Ren, ... Nucleic acids research 37 (suppl_2), W202-W208, 2009	6155	2009
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project ENCODE Project Consortium nature 447 (7146), 799, 2007	5351	2007
Knowledge-based analysis of microarray gene expression data by using support vector machines MPS Brown, WN Grundy, D Lin, N Cristianini, CW Sugnet, TS Furey, ... Proceedings of the National Academy of Sciences 97 (1), 262-267, 2000	3077	2000
FIMO: scanning for occurrences of a given motif CE Grant, TL Bailey, WS Noble Bioinformatics 27 (7), 1017-1018, 2011	2400	2011
Semi-supervised learning for peptide identification from shotgun proteomics datasets L Käll, JD Canterbury, J Weston, WS Noble, MJ MacCoss Nature methods 4 (11), 923-925, 2007	1575	2007
Assessing computational tools for the discovery of transcription factor binding sites M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ... Nature biotechnology 23 (1), 137-144, 2005	1518	2005
What is a support vector machine? WS Noble Nature biotechnology 24 (12), 1565-1567, 2006	1395	2006
The spectrum kernel: A string kernel for SVM protein classification C Leslie, E Eskin, WS Noble Biocomputing 2002, 564-575, 2001	1373	2001
Quantifying similarity between motifs S Gupta, JA Stamatoyannopoulos, TL Bailey, WS Noble Genome biology 8 (2), 1-9, 2007	1370	2007
Machine learning applications in genetics and genomics MW Libbrecht, WS Noble Nature Reviews Genetics 16 (6), 321-332, 2015	1080	2015
A three-dimensional model of the yeast genome Z Duan, M Andronescu, K Schutz, S McIlwain, YJ Kim, C Lee, J Shendure, ... Nature 465 (7296), 363-367, 2010	967	2010
Mismatch string kernels for discriminative protein classification CS Leslie, E Eskin, A Cohen, J Weston, WS Noble Bioinformatics 20 (4), 467-476, 2004	906	2004
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors J Wang, J Zhuang, S Iyer, XY Lin, TW Whitfield, MC Greven, BG Pierce, ... Genome research 22 (9), 1798-1812, 2012	893	2012
The MEME suite TL Bailey, J Johnson, CE Grant, WS Noble Nucleic acids research 43 (W1), W39-W49, 2015	873	2015
A statistical framework for genomic data fusion GRG Lanckriet, T De Bie, N Cristianini, MI Jordan, WS Noble Bioinformatics 20 (16), 2626-2635, 2004	837	2004
Kernel methods for predicting protein–protein interactions A Ben-Hur, WS Noble Bioinformatics 21 (suppl_1), i38-i46, 2005	729	2005
Global mapping of protein-DNA interactions in vivo by digital genomic footprinting JR Hesselberth, X Chen, Z Zhang, PJ Sabo, R Sandstrom, AP Reynolds, ... Nature methods 6 (4), 283-289, 2009	642	2009
Assigning significance to peptides identified by tandem mass spectrometry using decoy databases L Käll, JD Storey, MJ MacCoss, WS Noble Journal of proteome research 7 (01), 29-34, 2008	629	2008
How does multiple testing correction work? WS Noble Nature biotechnology 27 (12), 1135-1137, 2009	602	2009

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