A second generation force field for the simulation of proteins, nucleic acids, and organic molecules WD Cornell, P Cieplak, CI Bayly, IR Gould, KM Merz, DM Ferguson, ... Journal of the American Chemical Society 117 (19), 5179-5197, 1995 | 16138 | 1995 |
AMBER, a package of computer programs for applying molecular mechanics, normal mode analysis, molecular dynamics and free energy calculations to simulate the structural and … DA Pearlman, DA Case, JW Caldwell, WS Ross, TE Cheatham III, ... Computer Physics Communications 91 (1-3), 1-41, 1995 | 3770 | 1995 |
AMBER 9 DA Case, TA Darden, TE Cheatham III, CL Simmerling, J Wang, RE Duke, ... University of California, San Francisco 45, 2006 | 3474 | 2006 |
AMBER 4.1 DA Pearlman, DA Case, JW Caldwell, WS Ross, TE Cheatham III, ... University of California, San Francisco 45, 1995 | 722 | 1995 |
AMBER11. University of California, San Francisco DA Case, TA Darden, TE Cheatham III, CL Simmerling, J Wang, RE Duke, ... Google Scholar There is no corresponding record for this reference, 2010 | 380* | 2010 |
AMBER 5.0 DA Case, DA Pearlman, JW Caldwell, TE Cheatham III, WS Ross, ... University of California, San Francisco, 1997 | 347 | 1997 |
Spellmeyer WD Cornell, P Cieplak, CL Bayly, LR Gould, KM Merz, DM Ferguson DC, Fox, T., Caldwell, JW, and Kollman, PA, 5179-5197, 1995 | 255 | 1995 |
A new approach to probing conformational space with molecular mechanics: random incremental pulse search DM Ferguson, DJ Raber Journal of the American Chemical Society 111 (12), 4371-4378, 1989 | 254 | 1989 |
Constant temperature simulations using the Langevin equation with velocity Verlet integration MG Paterlini, DM Ferguson Chemical Physics 236 (1-3), 243-252, 1998 | 240 | 1998 |
Synthesis and evaluation of acridine-and acridone-based anti-herpes agents with topoisomerase activity JR Goodell, AA Madhok, H Hiasa, DM Ferguson Bioorganic & medicinal chemistry 14 (16), 5467-5480, 2006 | 197 | 2006 |
Parameterization and evaluation of a flexible water model DM Ferguson Journal of computational chemistry 16 (4), 501-511, 1995 | 177 | 1995 |
Identification of compounds with anti-West Nile virus activity JR Goodell, F Puig-Basagoiti, BM Forshey, PY Shi, DM Ferguson Journal of medicinal chemistry 49 (6), 2127-2137, 2006 | 176 | 2006 |
Isothermal-isobaric molecular dynamics simulations with Monte Carlo volume sampling KH Chow, DM Ferguson Computer physics communications 91 (1-3), 283-289, 1995 | 174 | 1995 |
Cation− π interactions: An energy decomposition analysis and its implication in δ-opioid receptor− ligand binding Y Mo, G Subramanian, J Gao, DM Ferguson Journal of the American Chemical Society 124 (17), 4832-4837, 2002 | 153 | 2002 |
Polymeric nanoparticles encapsulating novel TLR7/8 agonists as immunostimulatory adjuvants for enhanced cancer immunotherapy H Kim, L Niu, P Larson, TA Kucaba, KA Murphy, BR James, DM Ferguson, ... Biomaterials 164, 38-53, 2018 | 150 | 2018 |
Triaryl pyrazoline compound inhibits flavivirus RNA replication F Puig-Basagoiti, M Tilgner, BM Forshey, SM Philpott, NG Espina, ... Antimicrobial agents and chemotherapy 50 (4), 1320-1329, 2006 | 147 | 2006 |
Analysis of the Malondialdehyde− 2 ‘-Deoxyguanosine Adduct Pyrimidopurinone in Human Leukocyte DNA by Gas Chromatography/Electron Capture/Negative Chemical Ionization/Mass … CA Rouzer, AK Chaudhary, M Nokubo, DM Ferguson, GR Reddy, IA Blair, ... Chemical research in toxicology 10 (2), 181-188, 1997 | 140 | 1997 |
High-throughput assays using a luciferase-expressing replicon, virus-like particles, and full-length virus for West Nile virus drug discovery F Puig-Basagoiti, TS Deas, P Ren, M Tilgner, DM Ferguson, PY Shi Antimicrobial agents and chemotherapy 49 (12), 4980-4988, 2005 | 133 | 2005 |
Synthesis and cancer cell cytotoxicity of substituted xanthenes R Giri, JR Goodell, C Xing, A Benoit, H Kaur, H Hiasa, DM Ferguson Bioorganic & medicinal chemistry 18 (4), 1456-1463, 2010 | 128 | 2010 |
Acridine-based agents with topoisomerase II activity inhibit pancreatic cancer cell proliferation and induce apoptosis JR Goodell, AV Ougolkov, H Hiasa, H Kaur, R Remmel, DD Billadeau, ... Journal of medicinal chemistry 51 (2), 179-182, 2008 | 127 | 2008 |