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Mark Rogers
Mark Rogers
Invitae
Verified email at bristol.ac.uk
Title
Cited by
Cited by
Year
An integrative approach to predicting the functional effects of non-coding and coding sequence variation
HA Shihab, MF Rogers, J Gough, M Mort, DN Cooper, INM Day, TR Gaunt, ...
Bioinformatics 31 (10), 1536-1543, 2015
6622015
FATHMM-XF: accurate prediction of pathogenic point mutations via extended features
MF Rogers, HA Shihab, M Mort, DN Cooper, TR Gaunt, C Campbell
Bioinformatics 34 (3), 511-513, 2018
3342018
SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data
MF Rogers, J Thomas, ASN Reddy, A Ben-Hur
Genome biology 13, 1-17, 2012
1652012
Treating the placenta to prevent adverse effects of gestational hypoxia on fetal brain development
TJ Phillips, H Scott, DA Menassa, AL Bignell, A Sood, JS Morton, T Akagi, ...
Scientific reports 7 (1), 9079, 2017
1072017
Deciphering the plant splicing code: experimental and computational approaches for predicting alternative splicing and splicing regulatory elements
AS Reddy, MF Rogers, DN Richardson, M Hamilton, A Ben-Hur
Frontiers in plant science 3, 19249, 2012
1002012
Genome-wide analysis of alternative splicing in Chlamydomonas reinhardtii
A Labadorf, A Link, MF Rogers, J Thomas, ASN Reddy, A Ben-Hur
BMC genomics 11, 1-10, 2010
972010
Comparative analysis of serine/arginine-rich proteins across 27 eukaryotes: insights into sub-family classification and extent of alternative splicing
DN Richardson, MF Rogers, A Labadorf, A Ben-Hur, H Guo, AH Paterson, ...
PloS one 6 (9), e24542, 2011
842011
The use of gene ontology evidence codes in preventing classifier assessment bias
MF Rogers, A Ben-Hur
Bioinformatics 25 (9), 1173-1177, 2009
672009
CScape: a tool for predicting oncogenic single-point mutations in the cancer genome
MF Rogers, HA Shihab, TR Gaunt, C Campbell
Scientific reports 7 (1), 11597, 2017
642017
ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data
M Frenkel-Morgenstern, A Gorohovski, V Lacroix, M Rogers, K Ibanez, ...
Nucleic acids research 41 (D1), D142-D151, 2012
632012
Glucocorticoid receptor–tethered mineralocorticoid receptors increase glucocorticoid-induced transcriptional responses
CA Rivers, MF Rogers, FE Stubbs, BL Conway-Campbell, SL Lightman, ...
Endocrinology 160 (5), 1044-1056, 2019
462019
Improving Illumina assemblies with Hi‐C and long reads: An example with the North African dromedary
JP Elbers, MF Rogers, PL Perelman, AA Proskuryakova, NA Serdyukova, ...
Molecular Ecology Resources 19 (4), 1015-1026, 2019
442019
An integrative approach to predicting the functional effects of small indels in non-coding regions of the human genome
M Ferlaino, MF Rogers, HA Shihab, M Mort, DN Cooper, TR Gaunt, ...
BMC bioinformatics 18, 1-8, 2017
422017
HIPred: an integrative approach to predicting haploinsufficient genes
HA Shihab, MF Rogers, C Campbell, TR Gaunt
Bioinformatics 33 (12), 1751-1757, 2017
422017
iCLIP identifies novel roles for SAFB1 in regulating RNA processing and neuronal function
C Rivers, J Idris, H Scott, M Rogers, YB Lee, J Gaunt, L Phylactou, T Curk, ...
BMC biology 13, 1-15, 2015
292015
RNA sequencing analysis of human podocytes reveals glucocorticoid regulated gene networks targeting non-immune pathways
L Jiang, CCT Hindmarch, M Rogers, C Campbell, C Waterfall, J Coghill, ...
Scientific reports 6 (1), 35671, 2016
272016
CScape-somatic: distinguishing driver and passenger point mutations in the cancer genome
MF Rogers, TR Gaunt, C Campbell
Bioinformatics 36 (12), 3637-3644, 2020
232020
Maternal antioxidant treatment prevents the adverse effects of prenatal stress on the offspring's brain and behavior
H Scott, TJ Phillips, Y Sze, A Alfieri, MF Rogers, V Volpato, CP Case, ...
Neurobiology of stress 13, 100281, 2020
222020
Preeclamptic placentae release factors that damage neurons: implications for foetal programming of disease
H Scott, TJ Phillips, GC Stuart, MF Rogers, BR Steinkraus, S Grant, ...
Neuronal Signaling 2 (4), NS20180139, 2018
212018
Sex‐specific differences in cardiovascular and metabolic hormones with integrated signalling in the paraventricular nucleus of the hypothalamus
SP Loewen, AR Paterson, SY Loh, MF Rogers, CCT Hindmarch, ...
Experimental physiology 102 (11), 1373-1379, 2017
202017
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Articles 1–20