Tatyana Goldberg
Tatyana Goldberg
Allianz
Verified email at rostlab.org - Homepage
Title
Cited by
Cited by
Year
PredictProtein—an open resource for online prediction of protein structural and functional features
G Yachdav, E Kloppmann, L Kajan, M Hecht, T Goldberg, T Hamp, ...
Nucleic acids research 42 (W1), W337-W343, 2014
4662014
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17 (1), 1-19, 2016
2482016
A draft network of ligand–receptor-mediated multicellular signalling in human
JA Ramilowski, T Goldberg, J Harshbarger, E Kloppmann, M Lizio, ...
Nature communications 6 (1), 1-12, 2015
2372015
LocTree3 prediction of localization
T Goldberg, M Hecht, T Hamp, T Karl, G Yachdav, N Ahmed, U Altermann, ...
Nucleic acids research 42 (W1), W350-W355, 2014
1792014
Tools and data services registry: a community effort to document bioinformatics resources
J Ison, K Rapacki, H Ménager, M Kalaš, E Rydza, P Chmura, C Anthon, ...
Nucleic acids research 44 (D1), D38-D47, 2016
1062016
LocTree2 predicts localization for all domains of life
T Goldberg, T Hamp, B Rost
Bioinformatics 28 (18), i458-i465, 2012
1022012
MSAViewer: interactive JavaScript visualization of multiple sequence alignments
G Yachdav, S Wilzbach, B Rauscher, R Sheridan, I Sillitoe, J Procter, ...
Bioinformatics 32 (22), 3501-3503, 2016
1012016
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20 (1), 1-23, 2019
532019
LocFuse: human protein–protein interaction prediction via classifier fusion using protein localization information
J Zahiri, M Mohammad-Noori, R Ebrahimpour, S Saadat, JH Bozorgmehr, ...
Genomics 104 (6), 496-503, 2014
432014
Radiomics in radiooncology–challenging the medical physicist
JC Peeken, M Bernhofer, B Wiestler, T Goldberg, D Cremers, B Rost, ...
Physica medica 48, 27-36, 2018
362018
A combined omics approach to generate the surface atlas of human naive CD4+ T cells during early T-cell receptor activation
A Graessel, SM Hauck, C von Toerne, E Kloppmann, T Goldberg, ...
Molecular & Cellular Proteomics 14 (8), 2085-2102, 2015
342015
Translatomics combined with transcriptomics and proteomics reveals novel functional, recently evolved orphan genes in Escherichia coli O157:H7 (EHEC)
K Neuhaus, R Landstorfer, L Fellner, S Simon, A Schafferhans, ...
BMC genomics 17 (1), 133, 2016
242016
BioJS: an open source standard for biological visualisation–its status in 2014
M Corpas, R Jimenez, SJ Carbon, A García, L Garcia, T Goldberg, ...
F1000Research 3, 2014
212014
LocText: relation extraction of protein localizations to assist database curation
JM Cejuela, S Vinchurkar, T Goldberg, MSP Shankar, A Baghudana, ...
BMC bioinformatics 19 (1), 15, 2018
192018
Computational prediction shines light on type III secretion origins
T Goldberg, B Rost, Y Bromberg
Scientific reports 6, 34516, 2016
192016
Cutting edge: anatomy of BioJS, an open source community for the life sciences
G Yachdav, T Goldberg, S Wilzbach, D Dao, I Shih, S Choudhary, ...
Elife 4, e07009, 2015
182015
Nlsdb—major update for database of nuclear localization signals and nuclear export signals
M Bernhofer, T Goldberg, S Wolf, M Ahmed, J Zaugg, M Boden, B Rost
Nucleic acids research 46 (D1), D503-D508, 2018
162018
Evaluation and integration of functional annotation pipelines for newly sequenced organisms: the potato genome as a test case
D Amar, I Frades, A Danek, T Goldberg, SK Sharma, PE Hedley, ...
BMC plant biology 14 (1), 1-14, 2014
162014
Novel reductive dehalogenases from the marine sponge associated bacterium Desulfoluna spongiiphila
J Liu, N Lopez, Y Ahn, T Goldberg, Y Bromberg, LJ Kerkhof, ...
Environmental microbiology reports 9 (5), 537-549, 2017
132017
Discovery of numerous novel small genes in the intergenic regions of the Escherichia coli O157:H7 Sakai genome
SM Hücker, Z Ardern, T Goldberg, A Schafferhans, M Bernhofer, ...
PloS one 12 (9), e0184119, 2017
122017
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Articles 1–20