Job Dekker
TitleCited byYear
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
92152012
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
ENCODE Project Consortium
Nature 447 (7146), 799, 2007
49092007
Comprehensive mapping of long-range interactions reveals folding principles of the human genome
E Lieberman-Aiden, NL Van Berkum, L Williams, M Imakaev, T Ragoczy, ...
science 326 (5950), 289-293, 2009
41832009
Capturing chromosome conformation
J Dekker, K Rippe, M Dekker, N Kleckner
science 295 (5558), 1306-1311, 2002
28362002
The accessible chromatin landscape of the human genome
RE Thurman, E Rynes, R Humbert, J Vierstra, MT Maurano, E Haugen, ...
Nature 489 (7414), 75, 2012
19412012
Spatial partitioning of the regulatory landscape of the X-inactivation centre
EP Nora, BR Lajoie, EG Schulz, L Giorgetti, I Okamoto, N Servant, T Piolot, ...
Nature 485 (7398), 381, 2012
15912012
The ENCODE (ENCyclopedia of DNA elements) project
ENCODE Project Consortium
Science 306 (5696), 636-640, 2004
15112004
Mediator and cohesin connect gene expression and chromatin architecture
MH Kagey, JJ Newman, S Bilodeau, Y Zhan, DA Orlando, NL van Berkum, ...
Nature 467 (7314), 430, 2010
14942010
A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression
KC Wang, YW Yang, B Liu, A Sanyal, R Corces-Zimmerman, Y Chen, ...
Nature 472 (7341), 120, 2011
14212011
The long-range interaction landscape of gene promoters
A Sanyal, BR Lajoie, G Jain, J Dekker
Nature 489 (7414), 109, 2012
11642012
Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements
J Dostie, TA Richmond, RA Arnaout, RR Selzer, WL Lee, TA Honan, ...
Genome research 16 (10), 1299-1309, 2006
9552006
Architectural protein subclasses shape 3D organization of genomes during lineage commitment
JE Phillips-Cremins, MEG Sauria, A Sanyal, TI Gerasimova, BR Lajoie, ...
Cell 153 (6), 1281-1295, 2013
7782013
Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data
J Dekker, MA Marti-Renom, LA Mirny
Nature Reviews Genetics 14 (6), 390-403, 2013
7632013
Iterative correction of Hi-C data reveals hallmarks of chromosome organization
M Imakaev, G Fudenberg, RP McCord, N Naumova, A Goloborodko, ...
Nature methods 9 (10), 999, 2012
6332012
Organization of the mitotic chromosome
N Naumova, M Imakaev, G Fudenberg, Y Zhan, BR Lajoie, LA Mirny, ...
Science 342 (6161), 948-953, 2013
5792013
Proximity among distant regulatory elements at the β-globin locus requires GATA-1 and FOG-1
CR Vakoc, DL Letting, N Gheldof, T Sawado, MA Bender, M Groudine, ...
Molecular cell 17 (3), 453-462, 2005
5422005
Quantitative analysis of chromosome conformation capture assays (3C-qPCR)
H Hagège, P Klous, C Braem, E Splinter, J Dekker, G Cathala, W De Laat, ...
Nature protocols 2 (7), 1722, 2007
5372007
Defining functional DNA elements in the human genome
M Kellis, B Wold, MP Snyder, BE Bernstein, A Kundaje, GK Marinov, ...
Proceedings of the National Academy of Sciences 111 (17), 6131-6138, 2014
5322014
The hierarchy of the 3D genome
JH Gibcus, J Dekker
Molecular cell 49 (5), 773-782, 2013
5222013
Spatial organization of the mouse genome and its role in recurrent chromosomal translocations
Y Zhang, RP McCord, YJ Ho, BR Lajoie, DG Hildebrand, AC Simon, ...
Cell 148 (5), 908-921, 2012
4262012
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