Dr Sri Ramarathinam
Dr Sri Ramarathinam
Verified email at monash.edu
Cited by
Cited by
Discovery of an archetypal protein transport system in bacterial outer membranes
J Selkrig, K Mosbahi, CT Webb, MJ Belousoff, AJ Perry, TJ Wells, F Morris, ...
Nature structural & molecular biology 19 (5), 506-510, 2012
Dominant protection from HLA-linked autoimmunity by antigen-specific regulatory T cells
JD Ooi, J Petersen, YH Tan, M Huynh, ZJ Willett, SH Ramarathinam, ...
Nature 545 (7653), 243-247, 2017
An open-source computational and data resource to analyze digital maps of immunopeptidomes
E Caron, L Espona, DJ Kowalewski, H Schuster, N Ternette, A Alpizar, ...
Elife 4, e07661, 2015
A subset of HLA-I peptides are not genomically templated: Evidence for cis-and trans-spliced peptide ligands
P Faridi, C Li, SH Ramarathinam, JP Vivian, PT Illing, NA Mifsud, R Ayala, ...
Science immunology 3 (28), 2018
Mass spectrometry–based identification of MHC-bound peptides for immunopeptidomics
AW Purcell, SH Ramarathinam, N Ternette
Nature protocols 14 (6), 1687-1707, 2019
A modular BAM complex in the outer membrane of the α-proteobacterium Caulobacter crescentus
K Anwari, S Poggio, A Perry, X Gatsos, SH Ramarathinam, NA Williamson, ...
PloS one 5 (1), e8619, 2010
MHC-I peptides get out of the groove and enable a novel mechanism of HIV-1 escape
P Pymm, PT Illing, SH Ramarathinam, GM O'Connor, VA Hughes, ...
Nature structural & molecular biology 24 (4), 387-394, 2017
Phosphorylated self-peptides alter human leukocyte antigen class I-restricted antigen presentation and generate tumor-specific epitopes
J Petersen, SJ Wurzbacher, NA Williamson, SH Ramarathinam, HH Reid, ...
Proceedings of the National Academy of Sciences 106 (8), 2776-2781, 2009
Secreted HLA recapitulates the immunopeptidome and allows in-depth coverage of HLA A* 02: 01 ligands
KE Scull, NL Dudek, AJ Corbett, SH Ramarathinam, DG Gorasia, ...
Molecular immunology 51 (2), 136-142, 2012
A class of γδ T cell receptors recognize the underside of the antigen-presenting molecule MR1
J Le Nours, NA Gherardin, SH Ramarathinam, W Awad, F Wiede, ...
Science 366 (6472), 1522-1527, 2019
The interplay between citrullination and HLA-DRB1 polymorphism in shaping peptide binding hierarchies in rheumatoid arthritis
YT Ting, J Petersen, SH Ramarathinam, SW Scally, KL Loh, R Thomas, ...
Journal of Biological Chemistry 293 (9), 3236-3251, 2018
A comprehensive analysis of constitutive naturally processed and presented HLA‐C*04:01 (Cw4) – specific peptides
RB Schittenhelm, NL Dudek, NP Croft, SH Ramarathinam, AW Purcell
Tissue antigens 83 (3), 174-179, 2014
Improved peptide-MHC class II interaction prediction through integration of eluted ligand and peptide affinity data
C Garde, SH Ramarathinam, EC Jappe, M Nielsen, JV Kringelum, T Trolle, ...
Immunogenetics 71 (7), 445-454, 2019
Rapid microscale in-gel processing and digestion of proteins using surface acoustic waves
KP Kulkarni, SH Ramarathinam, J Friend, L Yeo, AW Purcell, P Perlmutter
Lab on a Chip 10 (12), 1518-1520, 2010
Structural and biological basis of CTL escape in coronavirus-infected mice
NS Butler, A Theodossis, AI Webb, MA Dunstone, R Nastovska, ...
The Journal of Immunology 180 (6), 3926-3937, 2008
A systems approach to understand antigen presentation and the immune response
NL Dudek, NP Croft, RB Schittenhelm, SH Ramarathinam, AW Purcell
Proteomics in Systems Biology, 189-209, 2016
Prevention of cytotoxic T cell escape using a heteroclitic subdominant viral T cell determinant
NS Butler, A Theodossis, AI Webb, R Nastovska, SH Ramarathinam, ...
PLoS Pathog 4 (10), e1000186, 2008
Identification of Native and Posttranslationally Modified HLA‐B* 57: 01‐Restricted HIV Envelope Derived Epitopes Using Immunoproteomics
SH Ramarathinam, S Gras, S Alcantara, AWS Yeung, NA Mifsud, S Sonza, ...
Proteomics 18 (12), 1700253, 2018
Employing proteomics in the study of antigen presentation: an update
SH Ramarathinam, NP Croft, PT Illing, P Faridi, AW Purcell
Expert review of proteomics 15 (8), 637-645, 2018
Response to Comment on" A subset of HLA-I peptides are not genomically templated: Evidence for cis-and trans-spliced peptide ligands"
P Faridi, C Li, SH Ramarathinam, PT Illing, NA Mifsud, R Ayala, J Song, ...
Science immunology 4 (38), eaaw8457, 2019
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