John P. Huelsenbeck
John P. Huelsenbeck
Verified email at berkeley.edu
TitleCited byYear
MrBayes 3: Bayesian phylogenetic inference under mixed models
F Ronquist, JP Huelsenbeck
Bioinformatics 19 (12), 1572-1574, 2003
259152003
MRBAYES: Bayesian inference of phylogenetic trees
JP Huelsenbeck, F Ronquist
Bioinformatics 17 (8), 754-755, 2001
22948*2001
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space
F Ronquist, M Teslenko, P Van Der Mark, DL Ayres, A Darling, S Höhna, ...
Systematic biology 61 (3), 539-542, 2012
115032012
Bayesian phylogenetic analysis of combined data
JAA Nylander, F Ronquist, JP Huelsenbeck, J Nieves-Aldrey
Systematic biology 53 (1), 47-67, 2004
17042004
Signal, noise, and reliability in molecular phylogenetic analyses
DM Hillis, JP Huelsenbeck
Journal of heredity 83 (3), 189-195, 1992
14261992
Phylogeny estimation and hypothesis testing using maximum likelihood
JP Huelsenbeck, KA Crandall
Annual Review of Ecology and Systematics 28 (1), 437-466, 1997
11371997
Parallel metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference
G Altekar, S Dwarkadas, JP Huelsenbeck, F Ronquist
Bioinformatics 20 (3), 407-415, 2004
9972004
Partitioning and combining data in phylogenetic analysis
JJ Bull, JP Huelsenbeck, CW Cunningham, DL Swofford, PJ Waddell
Systematic Biology 42 (3), 384-397, 1993
9951993
Potential applications and pitfalls of Bayesian inference of phylogeny
JP Huelsenbeck, B Larget, RE Miller, F Ronquist
Systematic biology 51 (5), 673-688, 2002
9082002
Combining data in phylogenetic analysis
JP Huelsenbeck, JJ Bull, CW Cunningham
Trends in Ecology & Evolution 11 (4), 152-158, 1996
8991996
Phylogenetic methods come of age: testing hypotheses in an evolutionary context
JP Huelsenbeck, B Rannala
Science 276 (5310), 227-232, 1997
8651997
Frequentist properties of Bayesian posterior probabilities of phylogenetic trees under simple and complex substitution models
JP Huelsenbeck, B Rannala
Systematic biology 53 (6), 904-913, 2004
7742004
Success of phylogenetic methods in the four-taxon case
JP Huelsenbeck, DM Hillis
Systematic Biology 42 (3), 247-264, 1993
7701993
Performance of phylogenetic methods in simulation
JP Huelsenbeck
Systematic biology 44 (1), 17-48, 1995
6761995
Application and accuracy of molecular phylogenies
DM Hillis, JP Huelsenbeck, CW Cunningham
Science 264 (5159), 671-677, 1994
5881994
Stochastic mapping of morphological characters
JP Huelsenbeck, R Nielsen, JP Bollback
Systematic Biology 52 (2), 131-158, 2003
5672003
Bayesian phylogenetic model selection using reversible jump Markov chain Monte Carlo
JP Huelsenbeck, B Larget, ME Alfaro
Molecular biology and evolution 21 (6), 1123-1133, 2004
4232004
Bias in phylogenetic estimation and its relevance to the choice between parsimony and likelihood methods
DL Swofford, PJ Waddell, JP Huelsenbeck, PG Foster, PO Lewis, ...
Systematic biology 50 (4), 525-539, 2001
4112001
A compound Poisson process for relaxing the molecular clock
JP Huelsenbeck, B Larget, D Swofford
Genetics 154 (4), 1879-1892, 2000
3632000
BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics
DL Ayres, A Darling, DJ Zwickl, P Beerli, MT Holder, PO Lewis, ...
Systematic biology 61 (1), 170-173, 2012
3612012
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