From reads to insight: a hitchhiker’s guide to ATAC-seq data analysis F Yan, DR Powell, DJ Curtis, NC Wong Genome biology 21, 1-16, 2020 | 321 | 2020 |
Age-related decline in primary CD8+ T cell responses is associated with the development of senescence in virtual memory CD8+ T cells KM Quinn, A Fox, KL Harland, BE Russ, J Li, THO Nguyen, L Loh, ... Cell reports 23 (12), 3512-3524, 2018 | 204 | 2018 |
Construction and analysis of chromosomal Clostridium difficile mutants JR O'Connor, D Lyras, KA Farrow, V Adams, DR Powell, J Hinds, ... Molecular microbiology 61 (5), 1335-1351, 2006 | 186 | 2006 |
Glucose homeostasis is important for immune cell viability during Candida challenge and host survival of systemic fungal infection TM Tucey, J Verma, PF Harrison, SL Snelgrove, TL Lo, AK Scherer, ... Cell metabolism 27 (5), 988-1006. e7, 2018 | 171 | 2018 |
Function of the Cytochrome bc1-aa3 Branch of the Respiratory Network in Mycobacteria and Network Adaptation Occurring in Response to Its Disruption LG Matsoso, BD Kana, PK Crellin, DJ Lea-Smith, A Pelosi, D Powell, ... Journal of bacteriology 187 (18), 6300-6308, 2005 | 152 | 2005 |
Global gene expression in skeletal muscle from well-trained strength and endurance athletes. NK Stepto, VG Coffey, AL Carey, AP Ponnampalam, BJ Canny, D Powell, ... Medicine and science in sports and exercise 41 (3), 546-565, 2009 | 147 | 2009 |
Effects of Temperature on Gene Expression Patterns in Leptospira interrogans Serovar Lai as Assessed by Whole-Genome Microarrays M Lo, DM Bulach, DR Powell, DA Haake, J Matsunaga, ML Paustian, ... Infection and immunity 74 (10), 5848-5859, 2006 | 147 | 2006 |
Reprogramming roadmap reveals route to human induced trophoblast stem cells X Liu, JF Ouyang, FJ Rossello, JP Tan, KC Davidson, DS Valdes, ... Nature 586 (7827), 101-107, 2020 | 134 | 2020 |
LFQ-analyst: an easy-to-use interactive web platform to analyze and visualize label-free proteomics data preprocessed with MaxQuant AD Shah, RJA Goode, C Huang, DR Powell, RB Schittenhelm Journal of proteome research 19 (1), 204-211, 2019 | 119 | 2019 |
Mesenchymal stromal cell apoptosis is required for their therapeutic function SHM Pang, J D’Rozario, S Mendonca, T Bhuvan, NL Payne, D Zheng, ... Nature communications 12 (1), 6495, 2021 | 93 | 2021 |
The transcriptomic response of Acinetobacter baumannii to colistin and doripenem alone and in combination in an in vitro pharmacokinetics/pharmacodynamics … R Henry, B Crane, D Powell, D Deveson Lucas, Z Li, J Aranda, P Harrison, ... Journal of Antimicrobial Chemotherapy 70 (5), 1303-1313, 2015 | 93 | 2015 |
Mesenchymal niche-derived neuregulin-1 drives intestinal stem cell proliferation and regeneration of damaged epithelium T Jardé, WH Chan, FJ Rossello, TK Kahlon, M Theocharous, TK Arackal, ... Cell Stem Cell 27 (4), 646-662. e7, 2020 | 86 | 2020 |
PAT-seq: a method to study the integration of 3′-UTR dynamics with gene expression in the eukaryotic transcriptome PF Harrison, DR Powell, JL Clancy, T Preiss, PR Boag, A Traven, ... Rna 21 (8), 1502-1510, 2015 | 84 | 2015 |
Insights into gonadal sex differentiation provided by single-cell transcriptomics in the chicken embryo MA Estermann, S Williams, CE Hirst, ZY Roly, O Serralbo, D Adhikari, ... Cell reports 31 (1), 2020 | 71 | 2020 |
Convergent adaptation in the dominant global hospital clone ST239 of methicillin-resistant Staphylococcus aureus SL Baines, KE Holt, MB Schultz, T Seemann, BO Howden, SO Jensen, ... MBio 6 (2), 10.1128/mbio. 00080-15, 2015 | 70 | 2015 |
Cell type of origin dictates the route to pluripotency CM Nefzger, FJ Rossello, J Chen, X Liu, AS Knaupp, J Firas, JM Paynter, ... Cell reports 21 (10), 2649-2660, 2017 | 52 | 2017 |
Identification of novel Acinetobacter baumannii type VI secretion system antibacterial effector and immunity pairs TC Fitzsimons, JM Lewis, A Wright, O Kleifeld, RB Schittenhelm, D Powell, ... Infection and immunity 86 (8), 10.1128/iai. 00297-18, 2018 | 50 | 2018 |
Community-driven development for computational biology at Sprints, Hackathons and Codefests S Möller, E Afgan, M Banck, RJP Bonnal, T Booth, J Chilton, PJA Cock, ... BMC bioinformatics 15, 1-7, 2014 | 50 | 2014 |
Emergence of high-level colistin resistance in an Acinetobacter baumannii clinical isolate mediated by inactivation of the global regulator H-NS D Deveson Lucas, B Crane, A Wright, ML Han, J Moffatt, D Bulach, ... Antimicrobial Agents and Chemotherapy 62 (7), 10.1128/aac. 02442-17, 2018 | 49 | 2018 |
RNAsik: A Pipeline for complete and reproducible RNA-seq analysis that runs anywhere with speed and ease K Tsyganov, A James Perry, S Kenneth Archer, D Powell Journal of Open Source Software 3 (28), 583, 2018 | 48 | 2018 |