Anuradha Wickramarachchi
Anuradha Wickramarachchi
Verified email at anu.edu.au - Homepage
Title
Cited by
Cited by
Year
GraphBin: refined binning of metagenomic contigs using assembly graphs
V Mallawaarachchi, A Wickramarachchi, Y Lin
Bioinformatics 36 (11), 3307-3313, 2020
142020
Managing complex workflows in bioinformatics: An interactive toolkit with GPU acceleration
A Welivita, I Perera, D Meedeniya, A Wickramarachchi, ...
IEEE transactions on nanobioscience 17 (3), 199-208, 2018
142018
Experiential Learning in Bioinformatics-Learner Support for Complex Workflow Modelling and Analysis.
V Mallawaarachchi, A Wickaramarachchi, A Weliwita, I Perera, ...
International Journal of Emerging Technologies in Learning 13 (12), 2018
72018
Efficient bioinformatics computations through gpu accelerated web services
V Mallawaarachchi, A Wickramarachchi, A Welivita, I Perera, ...
Proceedings of the 2018 2nd International Conference on Algorithms …, 2018
62018
MetaBCC-LR: metagenomics binning by coverage and composition for long reads
A Wickramarachchi, V Mallawaarachchi, V Rajan, Y Lin
Bioinformatics 36 (Supplement_1), i3-i11, 2020
42020
GraphBin2: Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs
VG Mallawaarachchi, AS Wickramarachchi, Y Lin
20th International Workshop on Algorithms in Bioinformatics (WABI 2020), 2020
32020
Alignment-free Whole Genome Comparison Using k-mer Forests
G Gamage, N Gimhana, A Wickramarachchi, V Mallawaarachchi, I Perera
2019 19th International Conference on Advances in ICT for Emerging Regions …, 2019
32019
Dimensionality reduction for cluster identification in metagenomics using autoencoders
U Maduranga, K Wijegunarathna, S Weerasinghe, I Perera, ...
2020 20th International Conference on Advances in ICT for Emerging Regions …, 2020
22020
An Adapter Architecture for heterogeneous data processing in bioinformatics pipelines
D Lenadora, A Wickramarachchi, D Meedeniya, V Mallawaarachchi, ...
2019 Moratuwa Engineering Research Conference (MERCon), 692-697, 2019
22019
A realtime monitoring platform for workflow subroutines
D Rathnayake, A Wickramarachchi, V Mallawaarachchi, D Meedeniya, ...
2018 18th International Conference on Advances in ICT for Emerging Regions …, 2018
22018
Use of nomadic computing devices for storage synchronization
A Wickramarachchi, D Atapattu, P Wimalasiri, RM Arachchi, G Dias
International Conference on Information Networking (ICOIN), 2018, 673-678, 2018
22018
Resource Aware Task Clustering for Scientific Workflow Execution in High Performance Computing Environments
A Weerasinghe, K Wijethunga, R Jayasekara, I Perera, ...
2020 IEEE 22nd International Conference on High Performance Computing and …, 2020
12020
Phylogenetic Tree Construction Using K-Mer Forest-Based Distance Calculation
G Gamage, N Gimhana, I Perera, S Bandara, T Pathirana, ...
International Association of Online Engineering, 2020
12020
Enhanced Student Learning in Proteomics-an Interactive Tool Support for Teaching Workflows
A Wickramarachchi, V Mallawaarachchi, D Meedeniya, I Perera, ...
2018 IEEE International Conference on Teaching, Assessment, and Learning for …, 2018
12018
Improving metagenomic binning results with overlapped bins using assembly graphs
VG Mallawaarachchi, AS Wickramarachchi, Y Lin
Algorithms for Molecular Biology 16 (1), 1-18, 2021
2021
GraphPlas: Refined Classification of Plasmid Sequences using Assembly Graphs
A Wickramarachchi, Y Lin
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2021
2021
Cluster Identification in Metagenomics–A Novel Technique of Dimensionality Reduction through Autoencoders
K Wijegunarathna, U Maduranga, S Weerasinghe, I Perera, ...
International Journal on Advances in ICT for Emerging Regions (ICTer) 14 (2), 2021
2021
LRBinner: Binning Long Reads in Metagenomics Datasets
A Wickramarachchi, Y Lin
21st International Workshop on Algorithms in Bioinformatics (WABI 2021), 2021
2021
PlasLR Enables Adaptation of Plasmid Prediction for Error-Prone Long Reads
A Wickramarachchi, V Mallawaarachchi, L Pu, Y Lin
bioRxiv, 2021
2021
MetaG: a comprehensive visualization tool to explore metagenomes
K Wijegunarathna, U Maduranga, S Weerasinghe, I Perera, ...
2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2020
2020
The system can't perform the operation now. Try again later.
Articles 1–20