| Traditional and digital biomarkers: two worlds apart? LM Babrak, J Menetski, M Rebhan, G Nisato, M Zinggeler, N Brasier, ... Digital biomarkers 3 (2), 92-102, 2019 | 125 | 2019 |
| Mycobacterium avium possesses extracellular DNA that contributes to biofilm formation, structural integrity, and tolerance to antibiotics SJ Rose, LM Babrak, LE Bermudez PloS one 10 (5), e0128772, 2015 | 83 | 2015 |
| Benchmarking immunoinformatic tools for the analysis of antibody repertoire sequences E Smakaj, L Babrak, M Ohlin, M Shugay, B Briney, D Tosoni, C Galli, ... Bioinformatics 36 (6), 1731-1739, 2020 | 45 | 2020 |
| Evaluation of eight live attenuated vaccine candidates for protection against challenge with virulent Mycobacterium avium subspecies paratuberculosis in mice JP Bannantine, JL Everman, SJ Rose, L Babrak, R Katani, RG Barletta, ... Frontiers in Cellular and Infection Microbiology 4, 88, 2014 | 36 | 2014 |
| The environment of “Mycobacterium avium subsp. hominissuis” microaggregates induces synthesis of small proteins associated with efficient infection of respiratory epithelial cells L Babrak, L Danelishvili, SJ Rose, T Kornberg, LE Bermudez Infection and Immunity 83 (2), 625-636, 2015 | 35 | 2015 |
| Mycobacterium tuberculosis proteome response to antituberculosis compounds reveals metabolic “escape” pathways that prolong bacterial survival L Danelishvili, N Shulzhenko, JJJ Chinison, L Babrak, J Hu, A Morgun, ... Antimicrobial Agents and Chemotherapy 61 (7), 10.1128/aac. 00430-17, 2017 | 25 | 2017 |
| Identification and verification of hybridoma-derived monoclonal antibody variable region sequences using recombinant DNA technology and mass spectrometry L Babrak, JA McGarvey, LH Stanker, R Hnasko Molecular immunology 90, 287-294, 2017 | 23 | 2017 |
| The real-world data challenges radar: a review on the challenges and risks regarding the use of real-world data F Grimberg, PM Asprion, B Schneider, E Miho, L Babrak, A Habbabeh Digital Biomarkers 5 (2), 148-157, 2021 | 22 | 2021 |
| Rapid microfluidic assay for the detection of botulinum neurotoxin in animal sera L Babrak, A Lin, LH Stanker, J McGarvey, R Hnasko Toxins 8 (1), 13, 2016 | 20 | 2016 |
| Microaggregate-associated protein involved in invasion of epithelial cells by Mycobacterium avium subsp. hominissuis L Babrak, L Danelishvili, SJ Rose, LE Bermudez Virulence 6 (7), 694-703, 2015 | 18 | 2015 |
| Evidence for genes associated with the ability of Mycobacterium avium subsp. hominissuis to escape apoptotic macrophages LE Bermudez, L Danelishvili, L Babrack, T Pham Frontiers in cellular and infection microbiology 5, 63, 2015 | 17 | 2015 |
| Mycobacterium tuberculosis alters the metalloprotease activity of the COP9 signalosome L Danelishvili, L Babrak, SJ Rose, J Everman, LE Bermudez MBio 5 (4), 10.1128/mbio. 01278-14, 2014 | 16 | 2014 |
| Identification of Mycobacterium avium subsp. hominissuis secreted proteins using an in vitro system mimicking the phagosomal environment JJ Chinison, L Danelishvili, R Gupta, SJ Rose, LM Babrak, LE Bermudez BMC microbiology 16, 1-12, 2016 | 12 | 2016 |
| Prospective artificial intelligence to dissect the dengue immune response and discover therapeutics EN Natali, LM Babrak, E Miho Frontiers in Immunology 12, 574411, 2021 | 10 | 2021 |
| Adaptive immune receptor repertoire (AIRR) community guide to repertoire analysis S Marquez, L Babrak, V Greiff, KB Hoehn, WD Lees, ET Luning Prak, ... Immunogenetics: Methods and Protocols, 297-316, 2022 | 6 | 2022 |
| Machine learning detects anti-DENV signatures in antibody repertoire sequences A Horst, E Smakaj, EN Natali, D Tosoni, LM Babrak, P Meier, E Miho Frontiers in Artificial Intelligence 4, 715462, 2021 | 6 | 2021 |
| Single cell gene expression analysis in a 3D microtissue liver model reveals cell type-specific responses to pro-fibrotic TGF-β1 stimulation CJ Messner, L Babrak, G Titolo, M Caj, E Miho, L Suter-Dick International Journal of Molecular Sciences 22 (9), 4372, 2021 | 6 | 2021 |
| Response of the respiratory mucosal cells to mycobacterium avium subsp. Hominissuis microaggregate L Babrak, LE Bermudez Archives of microbiology 200, 729-742, 2018 | 5 | 2018 |
| Liposome-ciprofloxacin inhibits Mycobacterium avium subs hominissuis (MAH) microaggregate formation in a dose and time dependent manner LE Bermudez, J Blanchard, L Babrak, I Gonda B49. NON-TUBERCULOUS MYCOBACTERIAL DISEASE AND CASE REPORTS, A3734-A3734, 2016 | 2 | 2016 |
| Presence of virulence-associated genes and ability to form biofilm among clinical isolates of Escherichia coli causing urinary infection in domestic animals C Hill, M Pan, L Babrak, L Danelishvili, H De Morais, LE Bermudez Advances in microbiology 5 (8), 573, 2015 | 2 | 2015 |
