Somali Chaterji
Somali Chaterji
Assistant Professor, Purdue University
Verified email at - Homepage
Cited by
Cited by
Smart polymeric gels: redefining the limits of biomedical devices
S Chaterji, IK Kwon, K Park
Progress in polymer science 32 (8-9), 1083-1122, 2007
Smart materials
IK Kwon, SW Kim, S Chaterji, K Vedantham, K Park
CRC Press, 2008
The MG-RAST metagenomics database and portal in 2015
A Wilke, J Bischof, W Gerlach, E Glass, T Harrison, KP Keegan, T Paczian, ...
Nucleic acids research 44 (D1), D590-D594, 2016
MG-RAST version 4—lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis
F Meyer, S Bagchi, S Chaterji, W Gerlach, A Grama, T Harrison, W Trimble, ...
Briefings in Bioinformatics 105, 2017
Synergistic Effects of Matrix Nanotopography and Stiffness on Vascular Smooth Muscle Cell Function
S Chaterji, P Kim, S Choe, J Tsui, C Lam, D Ho, A Baker, DH Kim
Tissue Engineering Part A, 2014
Rafiki: a middleware for parameter tuning of NoSQL datastores for dynamic metagenomics workloads
A Mahgoub, P Wood, S Ganesh, S Mitra, W Gerlach, T Harrison, F Meyer, ...
Proceedings of the 18th ACM/IFIP/USENIX Middleware Conference 2017, 28-40, 2017
EP-DNN: A Deep Neural Network-Based Global Enhancer Prediction Algorithm
SK Kim, M Harwani, S Grama, A., Chaterji
Nature Scientific Reports 6, 1-13, 2016
Scaffold-Free In Vitro Arterial Mimetics: The Importance of Smooth Muscle–Endothelium Contact
S Chaterji, K Park, A Panitch
Tissue Engineering Part A 16 (6), 1901-1912, 2010
CRISPR Genome Engineering for Human Pluripotent Stem Cell Research
S Chaterji, EH Ahn, DH Kim
Theranostics 7 (18), 4445-4469, 2017
Opening up the blackbox: An interpretable deep neural network-based classifier for cell-type specific enhancer predictions
SG Kim, NT Ampornpunt, CH Fang, M Harwani, AY Grama, S Chaterji
BMC Systems Biology, 2016
Sarvavid: a domain specific language for developing scalable computational genomics applications
K Mahadik, C Wright, J Zhang, M Kulkarni, S Bagchi, S Chaterji
Proceedings of the 2016 international conference on supercomputing, 1-12, 2016
MicroRNA Target Prediction using Thermodynamic and Sequence Curves
A Ghoshal, R Shankar, S Bagchi, A Grama, S Chaterji
BMC Genomics, 2015
Tiresias: Context-sensitive Approach to Decipher the Presence and Strength of MicroRNA Regulatory Interactions
J Koo, J Zhang, S Chaterji
Theranostics 8 (1), 277-291, 2017
Federation in genomics pipelines: techniques and challenges
S Chaterji, J Koo, N Li, F Meyer, A Grama, S Bagchi
Briefings in Bioinformatics 102 (1), 235-244, 2017
Orion: Scaling Genomic Sequence Matching with Fine-Grained Parallelization
K Mahadik, S Chaterji, B Zhou, M Kulkarni, S Bagchi
Supercomputing 2014 (The International Conference for High Peformance …, 2014
Syndecan-1 regulates vascular smooth muscle cell phenotype
S Chaterji, CH Lam, DS Ho, DC Proske, AB Baker
PloS one 9 (2), e89824, 2014
SOPHIA: Online Reconfiguration of Clustered NoSQL Databases for Time-Varying Workloads
A Mahgoub, P Wood, A Medoff, S Mitra, F Meyer, S Chaterji, S Bagchi
2019 USENIX Annual Technical Conference (USENIX ATC '19), 223-240, 2019
Enhanced osteoblast‐like cell adhesion and proliferation using sulfonate‐bearing polymeric scaffolds
S Chaterji, RA Gemeinhart
Journal of Biomedical Materials Research Part A: An Official Journal of The …, 2007
An Ensemble SVM Model for the Accurate Prediction of Non-Canonical MicroRNA Targets
A Ghoshal, A Grama, S Bagchi, S Chaterji
ACM-BCB Best Paper Award, pp. 403-412, 2015
Minerva: A reinforcement learning-based technique for optimal scheduling and bottleneck detection in distributed factory operations
TE Thomas, J Koo, S Chaterji, S Bagchi
2018 10th International Conference on Communication Systems & Networks …, 2018
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