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Kala Bharath Pilla
Kala Bharath Pilla
Computational structural biologist @ Etcembly.io
Verified email at etcembly.io - Homepage
Title
Cited by
Cited by
Year
A SARS-CoV-2 protein interaction map reveals targets for drug repurposing
DE Gordon, GM Jang, M Bouhaddou, J Xu, K Obernier, KM White, ...
Nature 583 (7816), 459-468, 2020
43552020
Macromolecular modeling and design in Rosetta: recent methods and frameworks
JK Leman, BD Weitzner, SM Lewis, J Adolf-Bryfogle, N Alam, RF Alford, ...
Nature methods 17 (7), 665-680, 2020
5622020
Three-dimensional protein fold determination from backbone amide pseudocontact shifts generated by lanthanide tags at multiple sites
H Yagi*, KB Pilla*, A Maleckis, B Graham, T Huber, G Otting
Structure 21 (6), 883-890, 2013
992013
Sensitive NMR approach for determining the binding mode of tightly binding ligand molecules to protein targets
WN Chen, C Nitsche, KB Pilla, B Graham, T Huber, CD Klein, G Otting
Journal of the American Chemical Society 138 (13), 4539-4546, 2016
562016
Magic angle spinning NMR structure determination of proteins from pseudocontact shifts
J Li, KB Pilla, Q Li, Z Zhang, X Su, T Huber, J Yang
Journal of the American Chemical Society 135 (22), 8294-8303, 2013
492013
InPACdb Indian plant anticancer compounds database
U Vetrivel, N Subramanian, KB Pilla
Bioinformation 4 (2), 71, 2009
332009
Capturing conformational states in proteins using sparse paramagnetic NMR data
KB Pilla, JK Leman, G Otting, T Huber
PLoS One 10 (5), e0127053, 2015
312015
Pseudocontact shift-driven iterative resampling for 3D structure determinations of large proteins
KB Pilla, G Otting, T Huber
Journal of Molecular Biology 428 (2), 522-532, 2016
272016
Bayesian metamodeling of complex biological systems across varying representations
AS Barak Raveh, Liping Sun, Kate L. White, Tanmoy Sanyal, Jeremy Tempkin ...
Proceedings of the National Academy of Sciences of the United States of …, 2021
23*2021
Protein structure determination by assembling super-secondary structure motifs using pseudocontact shifts
KB Pilla, G Otting, T Huber
Structure 25 (3), 559-568, 2017
202017
Soluble TREM2 inhibits secondary nucleation of Aβ fibrillization and enhances cellular uptake of fibrillar Aβ
KD Belsare, H Wu, D Mondal, A Bond, E Castillo, J Jin, H Jo, AE Roush, ...
Proceedings of the National Academy of Sciences 119 (5), e2114486119, 2022
152022
Open discovery: An integrated live Linux platform of Bioinformatics tools
U Vetrivel, KB Pilla
Bioinformation 3 (4), 144, 2008
132008
Molecular modeling of biomolecules by paramagnetic NMR and computational hybrid methods
KB Pilla, K Gaalswyk, JL MacCallum
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1865 (11), 1654-1663, 2017
122017
SSEThread: Integrative threading of the DNA-PKcs sequence based on data from chemical cross-linking and hydrogen deuterium exchange
DJ Saltzberg, M Hepburn, KB Pilla, DC Schriemer, SP Lees-Miller, ...
Progress in biophysics and molecular biology 147, 92-102, 2019
92019
3D computational modeling of proteins using sparse paramagnetic NMR data
KB Pilla, G Otting, T Huber
Bioinformatics: Volume II: Structure, Function, and Applications, 3-21, 2017
92017
A SARS-CoV-2-Human protein-Protein interaction map reveals drug targets and potential drug-repurposing (preprint)
DE Gordon, GM Jang, M Bouhaddou, J Xu, K Obernier, JZ Guo, ...
32020
Protein Fold Determination by Assembling Extended Super-Secondary Structure Motifs Using Limited NMR Data
KB Pilla
bioRxiv, 509356, 2019
2019
Protein structure determination by paramagnetic NMR and computational hybrid approach
KB Pilla
Australian National University, 2015
2015
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