Christian Rinke
TitleCited byYear
Insights into the phylogeny and coding potential of microbial dark matter
C Rinke, P Schwientek, A Sczyrba, NN Ivanova, IJ Anderson, JF Cheng, ...
Nature 499 (7459), 431, 2013
13192013
An environmental bacterial taxon with a large and distinct metabolic repertoire
MC Wilson, T Mori, C Rückert, AR Uria, MJ Helf, K Takada, C Gernert, ...
Nature 506 (7486), 58, 2014
4002014
Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
DH Parks, C Rinke, M Chuvochina, PA Chaumeil, BJ Woodcroft, ...
Nature microbiology 2 (11), 1533, 2017
3412017
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
DH Parks, M Chuvochina, DW Waite, C Rinke, A Skarshewski, ...
Nature biotechnology, 2018
3202018
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ...
Nature biotechnology 35 (8), 725, 2017
2232017
Microbial dark matter ecogenomics reveals complex synergistic networks in a methanogenic bioreactor
MK Nobu, T Narihiro, C Rinke, Y Kamagata, SG Tringe, T Woyke, WT Liu
The ISME journal 9 (8), 1710, 2015
1672015
Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics
C Rinke, J Lee, N Nath, D Goudeau, B Thompson, N Poulton, E Dmitrieff, ...
Nature protocols 9 (5), 1038, 2014
1432014
Decontamination of MDA reagents for single cell whole genome amplification
T Woyke, A Sczyrba, J Lee, C Rinke, D Tighe, S Clingenpeel, ...
PloS one 6 (10), e26161, 2011
1282011
Phylogeny and physiology of candidate phylum ‘Atribacteria’(OP9/JS1) inferred from cultivation-independent genomics
MK Nobu, JA Dodsworth, SK Murugapiran, C Rinke, EA Gies, G Webster, ...
The ISME journal 10 (2), 273, 2016
852016
Impact of single-cell genomics and metagenomics on the emerging view of extremophile “microbial dark matter”
BP Hedlund, JA Dodsworth, SK Murugapiran, C Rinke, T Woyke
Extremophiles 18 (5), 865-875, 2014
782014
Comparative genomic analysis of the class Epsilonproteobacteria and proposed reclassification to Epsilonbacteraeota (phyl. nov.)
DW Waite, I Vanwonterghem, C Rinke, DH Parks, Y Zhang, K Takai, ...
Frontiers in microbiology 8, 682, 2017
76*2017
Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges
J Kamke, A Sczyrba, N Ivanova, P Schwientek, C Rinke, K Mavromatis, ...
The ISME journal 7 (12), 2287, 2013
762013
Stop codon reassignments in the wild
NN Ivanova, P Schwientek, HJ Tripp, C Rinke, A Pati, M Huntemann, ...
Science 344 (6186), 909-913, 2014
742014
“Candidatus Thiobios zoothamnicoli,” an ectosymbiotic bacterium covering the giant marine ciliate Zoothamnium niveum
C Rinke, S Schmitz-Esser, K Stoecker, AD Nussbaumer, DA Molnár, ...
Appl. Environ. Microbiol. 72 (3), 2014-2021, 2006
602006
The candidate phylum Poribacteria by single-cell genomics: new insights into phylogeny, cell-compartmentation, eukaryote-like repeat proteins, and other genomic features
J Kamke, C Rinke, P Schwientek, K Mavromatis, N Ivanova, A Sczyrba, ...
PloS one 9 (1), e87353, 2014
522014
In Silico analysis of the metabolic potential and niche specialization of candidate phylum" Latescibacteria"(WS3)
NH Youssef, IF Farag, C Rinke, SJ Hallam, T Woyke, MS Elshahed
PloS one 10 (6), e0127499, 2015
472015
ProDeGe: a computational protocol for fully automated decontamination of genomes
K Tennessen, E Andersen, S Clingenpeel, C Rinke, DS Lundberg, J Han, ...
The ISME journal 10 (1), 269, 2016
442016
Molecular characterization of the symbionts associated with marine nematodes of the genus Robbea
C Bayer, NR Heindl, C Rinke, S Lücker, JA Ott, S Bulgheresi
Environmental Microbiology Reports 1 (2), 136-144, 2009
432009
Reconstructing each cell's genome within complex microbial communities—dream or reality?
S Clingenpeel, A Clum, P Schwientek, C Rinke, T Woyke
Frontiers in microbiology 5, 771, 2015
402015
Insights into the metabolism, lifestyle and putative evolutionary history of the novel archaeal phylum ‘Diapherotrites’
NH Youssef, C Rinke, R Stepanauskas, I Farag, T Woyke, MS Elshahed
The ISME journal 9 (2), 447, 2015
392015
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Articles 1–20