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Jonathan Badger
Jonathan Badger
Staff Scientist, National Cancer Institute
Verified email at nih.gov - Homepage
Title
Cited by
Cited by
Year
Structure, function and diversity of the healthy human microbiome
Human Microbiome Project Consortium
Nature 486 (7402), 207-14, 2012
107092012
A framework for human microbiome research
Human Microbiome Consortium
Nature. E-pub ahead of print. doi 10, 2012
2486*2012
The Phaeodactylum genome reveals the evolutionary history of diatom genomes
C Bowler, AE Allen, JH Badger, J Grimwood, K Jabbari, A Kuo, ...
Nature 456 (7219), 239-244, 2008
19532008
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus
HP Klenk, RA Clayton, JF Tomb, O White, KE Nelson, KA Ketchum, ...
Nature 390 (6658), 364-370, 1997
17441997
Fecal microbiota transplant overcomes resistance to anti–PD-1 therapy in melanoma patients
D Davar, AK Dzutsev, JA McCulloch, RR Rodrigues, JM Chauvin, ...
Science 371 (6529), 595-602, 2021
11022021
Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils
NL Ward, JF Challacombe, PH Janssen, B Henrissat, PM Coutinho, M Wu, ...
Applied and environmental microbiology 75 (7), 2046-2056, 2009
10692009
Comparative genomics of trypanosomatid parasitic protozoa
NM El-Sayed, PJ Myler, G Blandin, M Berriman, J Crabtree, G Aggarwal, ...
Science 309 (5733), 404-409, 2005
10382005
The Ectocarpus genome and the independent evolution of multicellularity in brown algae
JM Cock, L Sterck, P Rouzé, D Scornet, AE Allen, G Amoutzias, ...
Nature 465 (7298), 617-621, 2010
10082010
Macronuclear Genome Sequence of the Ciliate Tetrahymena thermophila, a Model Eukaryote
JA Eisen, RS Coyne, M Wu, D Wu, M Thiagarajan, JR Wortman, ...
PLoS biology 4 (9), e286, 2006
8762006
A catalog of reference genomes from the human microbiome
Human Microbiome Jumpstart Reference Strains Consortium, KE Nelson, ...
Science 328 (5981), 994-999, 2010
8502010
Wild mouse gut microbiota promotes host fitness and improves disease resistance
SP Rosshart, BG Vassallo, D Angeletti, DS Hutchinson, AP Morgan, ...
Cell 171 (5), 1015-1028. e13, 2017
7742017
Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas
AZ Worden, JH Lee, T Mock, P Rouzé, MP Simmons, AL Aerts, AE Allen, ...
Science 324 (5924), 268-272, 2009
7472009
An information-based sequence distance and its application to whole mitochondrial genome phylogeny
M Li, JH Badger, X Chen, S Kwong, P Kearney, H Zhang
Bioinformatics 17 (2), 149-154, 2001
7032001
Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species
DE Fouts, EF Mongodin, RE Mandrell, WG Miller, DA Rasko, J Ravel, ...
PLoS biology 3 (1), e15, 2005
6742005
Structure, function and diversity of the healthy human microbiome
HMP Consortium
nature 486 (7402), 207-214, 2012
6552012
Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus
ND Fedorova, N Khaldi, VS Joardar, R Maiti, P Amedeo, MJ Anderson, ...
PLoS genetics 4 (4), e1000046, 2008
5892008
Dietary fiber and probiotics influence the gut microbiome and melanoma immunotherapy response
CN Spencer, JL McQuade, V Gopalakrishnan, JA McCulloch, M Vetizou, ...
Science 374 (6575), 1632-1640, 2021
5412021
Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum
MA Van Den Berg, R Albang, K Albermann, JH Badger, JM Daran, ...
Nature biotechnology 26 (10), 1161-1168, 2008
5342008
CRITICA: coding region identification tool invoking comparative analysis.
JH Badger, GJ Olsen
Molecular biology and evolution 16 (4), 512-524, 1999
5041999
The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity
N Ziemert, S Podell, K Penn, JH Badger, E Allen, PR Jensen
PloS one 7 (3), e34064, 2012
4982012
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