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Stefano Mangiola
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Tracking the origins and drivers of subclonal metastatic expansion in prostate cancer
MKH Hong, G Macintyre, DC Wedge, P Van Loo, K Patel, S Lunke, ...
Nature communications 6 (1), 6605, 2015
3942015
Taurine deficiency as a driver of aging
P Singh, K Gollapalli, S Mangiola, D Schranner, MA Yusuf, M Chamoli, ...
Science 380 (6649), eabn9257, 2023
882023
Prostate cancer cell‐intrinsic interferon signaling regulates dormancy and metastatic outgrowth in bone
KL Owen, LJ Gearing, DJ Zanker, NK Brockwell, WH Khoo, DL Roden, ...
EMBO reports 21 (6), e50162, 2020
662020
Interfacing Seurat with the R tidy universe
S Mangiola, MA Doyle, AT Papenfuss
Bioinformatics 37 (22), 4100-4107, 2021
572021
Identification of G protein-coupled receptors in Schistosoma haematobium and S. mansoni by comparative genomics
TDL Campos, ND Young, PK Korhonen, RS Hall, S Mangiola, A Lonie, ...
Parasites & vectors 7, 1-11, 2014
422014
Detection of ctDNA in plasma of patients with clinically localised prostate cancer is associated with rapid disease progression
E Lau, P McCoy, F Reeves, K Chow, M Clarkson, EM Kwan, K Packwood, ...
Genome medicine 12, 1-11, 2020
392020
Cell quiescence correlates with enhanced glioblastoma cell invasion and cytotoxic resistance
RJ Atkins, SS Stylli, N Kurganovs, S Mangiola, CJ Nowell, TM Ware, ...
Experimental cell research 374 (2), 353-364, 2019
392019
Two of a kind: transmissible Schwann cell cancers in the endangered Tasmanian devil (Sarcophilus harrisii)
AL Patchett, THH Coorens, J Darby, R Wilson, MJ McKay, KS Kamath, ...
Cellular and Molecular Life Sciences 77, 1847-1858, 2020
332020
Getting the most out of parasitic helminth transcriptomes using HelmDB: implications for biology and biotechnology
S Mangiola, ND Young, P Korhonen, A Mondal, JP Scheerlinck, ...
Biotechnology advances 31 (8), 1109-1119, 2013
312013
tidybulk: an R tidy framework for modular transcriptomic data analysis
S Mangiola, R Molania, R Dong, MA Doyle, AT Papenfuss
Genome biology 22, 1-15, 2021
272021
The site of breast cancer metastases dictates their clonal composition and reversible transcriptomic profile
J Berthelet, VC Wimmer, HJ Whitfield, A Serrano, T Boudier, S Mangiola, ...
Science advances 7 (28), eabf4408, 2021
272021
A transcriptional signature of PDGF-DD activated natural killer cells predicts more favorable prognosis in low-grade glioma
Y Sun, AJ Sedgwick, Y Palarasah, S Mangiola, AD Barrow
Frontiers in Immunology 12, 668391, 2021
252021
Periprostatic fat tissue transcriptome reveals a signature diagnostic for high-risk prostate cancer
S Mangiola, R Stuchbery, G Macintyre, MJ Clarkson, JS Peters, ...
Endocrine-related cancer, ERC-18-0058, 2018
252018
tidyHeatmap: an R package for modular heatmap production based on tidy principles
S Mangiola, AT Papenfuss
Journal of Open Source Software 5 (52), 2472, 2020
242020
Comparing nodal versus bony metastatic spread using tumour phylogenies
S Mangiola, MKH Hong, M Cmero, N Kurganovs, A Ryan, AJ Costello, ...
Scientific reports 6 (1), 33918, 2016
232016
Androgen deprivation therapy promotes an obesity-like microenvironment in periprostatic fat
S Mangiola, R Stuchbery, P McCoy, K Chow, N Kurganovs, M Kerger, ...
Endocrine connections 8 (5), 547-558, 2019
222019
A transcriptional signature of IL-2 expanded natural killer cells predicts more favorable prognosis in bladder cancer
Y Sun, AJ Sedgwick, MAAK Khan, Y Palarasah, S Mangiola, AD Barrow
Frontiers in immunology 12, 724107, 2021
162021
Prognostic utility of a whole-blood androgen receptor-based gene signature in metastatic castration-resistant prostate cancer
EM Kwan, H Fettke, MM Docanto, SQ To, P Bukczynska, A Mant, D Pook, ...
European Urology Focus 7 (1), 63-70, 2021
162021
Insights into the immuno-molecular biology of Angiostrongylus vasorum through transcriptomics—prospects for new interventions
BRE Ansell, M Schnyder, P Deplazes, PK Korhonen, ND Young, RS Hall, ...
Biotechnology advances 31 (8), 1486-1500, 2013
162013
Probabilistic outlier identification for RNA sequencing generalized linear models
S Mangiola, EA Thomas, M Modrák, A Vehtari, AT Papenfuss
NAR genomics and bioinformatics 3 (1), lqab005, 2021
152021
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Articles 1–20