Kristina Hettne
Kristina Hettne
Expert Open Access and Data Management
Verified email at - Homepage
Cited by
Cited by
A dictionary to identify small molecules and drugs in free text
KM Hettne, RH Stierum, MJ Schuemie, PJM Hendriksen, ...
Bioinformatics 25 (22), 2983-2991, 2009
Using a suite of ontologies for preserving workflow-centric research objects
K Belhajjame, J Zhao, D Garijo, M Gamble, K Hettne, R Palma, E Mina, ...
Journal of Web Semantics 32, 16-42, 2015
Why workflows break—Understanding and combating decay in Taverna workflows
J Zhao, JM Gomez-Perez, K Belhajjame, G Klyne, E Garcia-Cuesta, ...
2012 IEEE 8th International Conference on E-Science, 1-9, 2012
Chemical and biological profiling of an annotated compound library directed to the nuclear receptor family
M Cases, R García-Serna, K Hettne, M Weeber, JV Lei, S Boyer, ...
Current topics in medicinal chemistry 5 (8), 763-772, 2005
Towards the Preservation of Scientific Workflows.
D De Roure, CA Goble, G Klyne, M Roos, KM Hettne, JE Ruiz, R Palma, ...
iPRES, 2011
Rewriting and suppressing UMLS terms for improved biomedical term identification
KM Hettne, EM van Mulligen, MJ Schuemie, BJA Schijvenaars, JA Kors
Journal of biomedical semantics 1 (1), 5, 2010
Automatic mining of the literature to generate new hypotheses for the possible link between periodontitis and atherosclerosis: lipopolysaccharide as a case study
KM Hettne, M Weeber, ML Laine, H Cate, S Boyer, JA Kors, BG Loos
Journal of clinical periodontology 34 (12), 1016-1024, 2007
Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining
KM Hettne, AJ Williams, EM van Mulligen, J Kleinjans, V Tkachenko, ...
Journal of cheminformatics 2 (1), 1-7, 2010
Best practices for workflow design: how to prevent workflow decay
K Hettne, K Wolstencroft, K Belhajjame, C Goble, E Mina, H Dharuri, ...
Semantic Web Applications and Tools for the Life Sciences (SWAT4LS 2012), 2012
Applied information retrieval and multidisciplinary research: new mechanistic hypotheses in complex regional pain syndrome
KM Hettne, M De Mos, AGJ De Bruijn, M Weeber, S Boyer, ...
Journal of biomedical discovery and collaboration 2 (1), 2, 2007
Literature-aided interpretation of gene expression data with the weighted global test
R Jelier, JJ Goeman, KM Hettne, MJ Schuemie, JT den Dunnen, ...
Briefings in bioinformatics 12 (5), 518-529, 2011
Integration of targeted metabolomics and transcriptomics identifies deregulation of phosphatidylcholine metabolism in Huntington’s disease peripheral blood samples
A Mastrokolias, R Pool, E Mina, KM Hettne, E van Duijn, RC van der Mast, ...
Metabolomics 12 (8), 137, 2016
Structuring research methods and data with the research object model: genomics workflows as a case study
KM Hettne, H Dharuri, J Zhao, K Wolstencroft, K Belhajjame, ...
Journal of biomedical semantics 5 (1), 41, 2014
Recognition of chemical entities: combining dictionary-based and grammar-based approaches
SA Akhondi, KM Hettne, E van der Horst, EM van Mulligen, JA Kors
J Cheminform 7 (Suppl 1), S10, 2015
The implicitome: A resource for rationalizing gene-disease associations
KM Hettne, M Thompson, HH van Haagen, E Van Der Horst, ...
PloS one 11 (2), 2016
Training multidisciplinary biomedical informatics students: three years of experience
EM Van Mulligen, M Cases, K Hettne, E Molero, M Weeber, KA Robertson, ...
Journal of the American Medical Informatics Association 15 (2), 246-254, 2008
Common disease signatures from gene expression analysis in Huntington’s disease human blood and brain
E Mina, W van Roon-Mom, K Hettne, E Van Zwet, J Goeman, C Neri, ...
Orphanet journal of rare diseases 11 (1), 97, 2016
The research object suite of ontologies: Sharing and exchanging research data and methods on the open web
K Belhajjame, J Zhao, D Garijo, K Hettne, R Palma, Ó Corcho, ...
arXiv preprint arXiv:1401.4307, 2014
Automated workflow-based exploitation of pathway databases provides new insights into genetic associations of metabolite profiles
H Dharuri, P Henneman, A Demirkan, JB van Klinken, ...
BMC genomics 14 (1), 865, 2013
Next-generation text-mining mediated generation of chemical response-specific gene sets for interpretation of gene expression data
KM Hettne, A Boorsma, DAM van Dartel, JJ Goeman, E de Jong, ...
BMC medical genomics 6 (1), 2, 2013
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