Yue Li
Cited by
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N6-methyladenosine modification destabilizes developmental regulators in embryonic stem cells
Y Wang, Y Li, JI Toth, MD Petroski, Z Zhang, JC Zhao
Nature cell biology 16 (2), 191-198, 2014
Association studies of up to 1.2 million individuals yield new insights into the genetic etiology of tobacco and alcohol use
M Liu, Y Jiang, R Wedow, Y Li, DM Brazel, F Chen, G Datta, ...
Nature genetics 51 (2), 237-244, 2019
Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 583 (7818), 699-710, 2020
SMN and symmetric arginine dimethylation of RNA polymerase II C-terminal domain control termination
DY Zhao, G Gish, U Braunschweig, Y Li, Z Ni, FW Schmitges, G Zhong, ...
Nature 529 (7584), 48-53, 2016
N 6-methyladenosine RNA modification regulates embryonic neural stem cell self-renewal through histone modifications
Y Wang, Y Li, M Yue, J Wang, S Kumar, RJ Wechsler-Reya, Z Zhang, ...
Nature neuroscience 21 (2), 195-206, 2018
Mycobacterium avium subsp. paratuberculosis inhibits gamma interferon-induced signaling in bovine monocytes: insights into the cellular mechanisms of Johne's disease
RJ Arsenault, Y Li, K Bell, K Doig, A Potter, PJ Griebel, A Kusalik, ...
Infection and immunity 80 (9), 3039-3048, 2012
Mirsynergy: detecting synergistic miRNA regulatory modules by overlapping neighbourhood expansion
Y Li, C Liang, KC Wong, J Luo, Z Zhang
Bioinformatics, 1-8, 2014
Regression Analysis of Combined Gene Expression Regulation in Acute Myeloid Leukemia
Y Li, M Liang, Z Zhang
PloS Computational Biology 10 (10), e1003908, 2014
A systematic approach for analysis of peptide array kinome data
Y Li, RJ Arsenault, B Trost, J Slind, PJ Griebel, S Napper, A Kusalik
Science signaling 5 (220), pl2-pl2, 2012
Joint Bayesian inference of risk variants and tissue-specific epigenomic enrichments across multiple complex human diseases
Y Li, M Kellis
Nucleic Acids Research, 1-13, 2016
A novel method to detect functional microRNA regulatory modules by bicliques merging
C Liang, Y Li, J Luo
IEEE/ACM transactions on computational biology and bioinformatics 13 (3 …, 2015
DNA motif elucidation using belief propagation
KC Wong, TM Chan, C Peng, Y Li, Z Zhang
Nucleic acids research 41 (16), e153-e153, 2013
Altered Toll-like receptor 9 signaling in Mycobacterium avium subsp. paratuberculosis-infected bovine monocytes reveals potential therapeutic targets
RJ Arsenault, Y Li, P Maattanen, E Scruten, K Doig, A Potter, P Griebel, ...
Infection and immunity 81 (1), 226-237, 2013
RIPSeeker: a statistical package for identifying protein-associated transcripts from RIP-seq experiments
Y Li, DY Zhao, JF Greenblatt, Z Zhang
Nucleic acids research 41 (8), e94-e94, 2013
Inferring probabilistic miRNA–mRNA interaction signatures in cancers: a role-switch approach
Y Li, C Liang, KC Wong, K Jin, Z Zhang
Nucleic acids research 42 (9), e76-e76, 2014
A probabilistic approach to explore human miRNA targetome by integrating miRNA-overexpression data and sequence information
Y Li, A Goldenberg, KC Wong, Z Zhang
Bioinformatics 30 (5), 621-628, 2014
Computational Biology in microRNA
Y Li, Z Zhang
WIREs RNA, 2015
SignalSpider: probabilistic pattern discovery on multiple normalized ChIP-Seq signal profiles
KC Wong, Y Li, C Peng, Z Zhang
Bioinformatics 31 (1), 17-24, 2015
A novel motif-discovery algorithm to identify co-regulatory motifs in large transcription factor and microRNA co-regulatory networks in human
C Liang, Y Li, J Luo, Z Zhang
Bioinformatics, 1-8, 2015
Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci
JM Mudge, I Jungreis, T Hunt, JM Gonzalez, JC Wright, M Kay, ...
Genome research 29 (12), 2073-2087, 2019
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