Shaomei He
TitleCited byYear
Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities
HG Martin, N Ivanova, V Kunin, F Warnecke, KW Barry, AC McHardy, ...
Nature biotechnology 24 (10), 1263, 2006
6482006
Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities
HG Martin, N Ivanova, V Kunin, F Warnecke, KW Barry, AC McHardy, ...
Nature biotechnology 24 (10), 1263, 2006
6482006
“Candidatus Accumulibacter” population structure in enhanced biological phosphorus removal sludges as revealed by polyphosphate kinase genes
S He, DL Gall, KD McMahon
Appl. Environ. Microbiol. 73 (18), 5865-5874, 2007
2212007
Primer and platform effects on 16S rRNA tag sequencing
J Tremblay, K Singh, A Fern, ES Kirton, S He, T Woyke, J Lee, F Chen, ...
Frontiers in microbiology 6, 771, 2015
2182015
Validation of two ribosomal RNA removal methods for microbial metatranscriptomics
S He, O Wurtzel, K Singh, JL Froula, S Yilmaz, SG Tringe, Z Wang, ...
Nature methods 7 (10), 807, 2010
1872010
Denitrification capabilities of two biological phosphorus removal sludges dominated by different ‘Candidatus Accumulibacter’ clades
JJ Flowers, S He, S Yilmaz, DR Noguera, KD McMahon
Environmental microbiology reports 1 (6), 583-588, 2009
1662009
A bacterial metapopulation adapts locally to phage predation despite global dispersal
V Kunin, S He, F Warnecke, SB Peterson, HG Martin, M Haynes, ...
Genome Research 18 (2), 293-297, 2008
1512008
Comparative metagenomic and metatranscriptomic analysis of hindgut paunch microbiota in wood-and dung-feeding higher termites
S He, N Ivanova, E Kirton, M Allgaier, C Bergin, RH Scheffrahn, ...
PloS one 8 (4), e61126, 2013
1282013
Progress toward understanding the distribution of Accumulibacter among full-scale enhanced biological phosphorus removal systems
S He, AZ Gu, KD McMahon
Microbial ecology 55 (2), 229-236, 2008
942008
Fine-scale differences between Accumulibacter-like bacteria in enhanced biological phosphorus removal activated sludge
S He, AZ Gu, KD McMahon
Water science and technology 54 (1), 111-117, 2006
742006
Polyphosphate kinase genes from full-scale activated sludge plants
KD McMahon, S Yilmaz, S He, DL Gall, D Jenkins, JD Keasling
Applied microbiology and biotechnology 77 (1), 167-173, 2007
702007
Metatranscriptomic array analysis of ‘Candidatus Accumulibacter phosphatis’‐enriched enhanced biological phosphorus removal sludge
S He, V Kunin, M Haynes, HG Martin, N Ivanova, F Rohwer, P Hugenholtz, ...
Environmental microbiology 12 (5), 1205-1217, 2010
682010
Comparative genomics of two ‘Candidatus Accumulibacter’ clades performing biological phosphorus removal
JJ Flowers, S He, S Malfatti, TG Del Rio, SG Tringe, P Hugenholtz, ...
The ISME journal 7 (12), 2301, 2013
652013
Microbiology of ‘Candidatus Accumulibacter’ in activated sludge
S He, KD McMahon
Microbial biotechnology 4 (5), 603-619, 2011
632011
Candidatus Accumulibacter’ gene expression in response to dynamic EBPR conditions
S He, KD McMahon
The ISME journal 5 (2), 329, 2011
552011
Phage encoded H-NS: a potential achilles heel in the bacterial defence system
CT Skennerton, FE Angly, M Breitbart, L Bragg, S He, KD McMahon, ...
PLoS One 6 (5), e20095, 2011
402011
Bacterial community and “Candidatus Accumulibacter” population dynamics in laboratory-scale enhanced biological phosphorus removal reactors
S He, FI Bishop, KD McMahon
Appl. Environ. Microbiol. 76 (16), 5479-5487, 2010
392010
Patterns in wetland microbial community composition and functional gene repertoire associated with methane emissions
S He, SA Malfatti, JW McFarland, FE Anderson, A Pati, M Huntemann, ...
MBio 6 (3), e00066-15, 2015
322015
Metagenomic analyses of the autotrophic Fe (II)-oxidizing, nitrate-reducing enrichment culture KS
S He, C Tominski, A Kappler, S Behrens, EE Roden
Appl. Environ. Microbiol. 82 (9), 2656-2668, 2016
312016
Comparative genomic analysis of neutrophilic iron (II) oxidizer genomes for candidate genes in extracellular electron transfer
S He, RA Barco, D Emerson, EE Roden
Frontiers in microbiology 8, 1584, 2017
252017
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Articles 1–20