Andrew J. Page
Andrew J. Page
Head of Informatics, Quadram Institute Bioscience
Verified email at quadram.ac.uk - Homepage
Title
Cited by
Cited by
Year
Roary: rapid large-scale prokaryote pan genome analysis
AJ Page, CA Cummins, M Hunt, VK Wong, S Reuter, MTG Holden, ...
Bioinformatics 31 (22), 3691-3693, 2015
10392015
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
NJ Croucher, AJ Page, TR Connor, AJ Delaney, JA Keane, SD Bentley, ...
Nucleic acids research 43 (3), e15-e15, 2015
6252015
Dense genomic sampling identifies highways of pneumococcal recombination
C Chewapreecha, SR Harris, NJ Croucher, C Turner, P Marttinen, ...
Nature genetics 46 (3), 305, 2014
2822014
Dynamic task scheduling using genetic algorithms for heterogeneous distributed computing
AJ Page, TJ Naughton
19th IEEE international parallel and distributed processing symposium, 8 pp., 2005
262*2005
Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter-and intracontinental transmission events
VK Wong, S Baker, DJ Pickard, J Parkhill, AJ Page, NA Feasey, ...
Nature genetics 47 (6), 632-639, 2015
2612015
SNP-sites: rapid efficient extraction of SNPs from multi-FASTA alignments
AJ Page, B Taylor, AJ Delaney, J Soares, T Seemann, JA Keane, ...
Microbial genomics 2 (4), 2016
1752016
Epithelial IL-22RA1-mediated fucosylation promotes intestinal colonization resistance to an opportunistic pathogen
TAN Pham, S Clare, D Goulding, JM Arasteh, MD Stares, HP Browne, ...
Cell host & microbe 16 (4), 504-516, 2014
1572014
ARIBA: rapid antimicrobial resistance genotyping directly from sequencing reads
M Hunt, AE Mather, L Sánchez-Busó, AJ Page, J Parkhill, JA Keane, ...
Microbial genomics 3 (10), 2017
1562017
Emergence of an extensively drug-resistant Salmonella enterica serovar Typhi clone harboring a promiscuous plasmid encoding resistance to fluoroquinolones and third-generation …
EJ Klemm, S Shakoor, AJ Page, FN Qamar, K Judge, DK Saeed, ...
MBio 9 (1), e00105-18, 2018
1452018
Robust high throughput prokaryote de novo assembly and improvement pipeline for Illumina data
AJ Page, N De Silva, M Hunt, MA Quail, J Parkhill, SR Harris, TD Otto, ...
Microbial Genomics 2 (8), 2016
1142016
Multi-heuristic dynamic task allocation using genetic algorithms in a heterogeneous distributed system
AJ Page, TM Keane, TJ Naughton
Journal of parallel and distributed computing 70 (7), 758-766, 2010
1042010
Microevolution of monophasic Salmonella typhimurium during epidemic, United Kingdom, 2005–2010
L Petrovska, AE Mather, M AbuOun, P Branchu, SR Harris, T Connor, ...
Emerging infectious diseases 22 (4), 617, 2016
702016
An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid
VK Wong, S Baker, TR Connor, D Pickard, AJ Page, J Dave, N Murphy, ...
Nature communications 7 (1), 1-11, 2016
562016
The TraDIS toolkit: sequencing and analysis for dense transposon mutant libraries
L Barquist, M Mayho, C Cummins, AK Cain, CJ Boinett, AJ Page, ...
Bioinformatics 32 (7), 1109-1111, 2016
542016
Using commodity graphics hardware for real-time digital hologram view-reconstruction
L Ahrenberg, AJ Page, BM Hennelly, JB McDonald, TJ Naughton
Journal of display technology 5 (4), 111-119, 2009
512009
Global phylogeography and evolutionary history of Shigella dysenteriae type 1
E Njamkepo, N Fawal, A Tran-Dien, J Hawkey, N Strockbine, C Jenkins, ...
Nature microbiology 1 (4), 1-10, 2016
432016
Multilocus sequence typing by blast from de novo assemblies against PubMLST
AJ Page, B Taylor, JA Keane
Journal of Open Source Software 1 (8), 2016
312016
A phylogenetic and phenotypic analysis of Salmonella enterica serovar Weltevreden, an emerging agent of diarrheal disease in tropical regions
C Makendi, AJ Page, BW Wren, TLT Phuong, S Clare, C Hale, D Goulding, ...
PLOS Neglected Tropical Diseases, 2016
292016
Comparison of classical multi-locus sequence typing software for next-generation sequencing data
AJ Page, NF Alikhan, HA Carleton, T Seemann, JA Keane, LS Katz
Microbial genomics 3 (8), 2017
232017
Molecular surveillance identifies multiple transmissions of typhoid in West Africa
International Typhoid Consortium, VK Wong, KE Holt, C Okoro, S Baker, ...
PLoS neglected tropical diseases 10 (9), e0004781, 2016
232016
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Articles 1–20