| Type 2C protein phosphatases directly regulate abscisic acid-activated protein kinases in Arabidopsis T Umezawa, N Sugiyama, M Mizoguchi, S Hayashi, F Myouga, ... Proceedings of the National Academy of sciences 106 (41), 17588-17593, 2009 | 812 | 2009 |
| Multiple high-throughput analyses monitor the response of E. coli to perturbations N Ishii, K Nakahigashi, T Baba, M Robert, T Soga, A Kanai, T Hirasawa, ... Science 316 (5824), 593-597, 2007 | 697 | 2007 |
| Phosphopeptide enrichment by aliphatic hydroxy acid-modified metal oxide chromatography for nano-LC-MS/MS in proteomics applications N Sugiyama, T Masuda, K Shinoda, A Nakamura, M Tomita, Y Ishihama Molecular & cellular proteomics 6 (6), 1103-1109, 2007 | 453 | 2007 |
| Large‐scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis N Sugiyama, H Nakagami, K Mochida, A Daudi, M Tomita, K Shirasu, ... Molecular systems biology 4 (1), 193, 2008 | 389 | 2008 |
| Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants H Nakagami, N Sugiyama, K Mochida, A Daudi, Y Yoshida, T Toyoda, ... Plant physiology 153 (3), 1161-1174, 2010 | 355 | 2010 |
| Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana T Umezawa, N Sugiyama, F Takahashi, JC Anderson, Y Ishihama, ... Science signaling 6 (270), rs8-rs8, 2013 | 301 | 2013 |
| jPOSTrepo: an international standard data repository for proteomes S Okuda, Y Watanabe, Y Moriya, S Kawano, T Yamamoto, M Matsumoto, ... Nucleic acids research 45 (D1), D1107-D1111, 2017 | 168 | 2017 |
| Automated phosphoproteome analysis for cultured cancer cells by two-dimensional nanoLC-MS using a calcined titania/C18 biphasic column K Imami, N Sugiyama, Y Kyono, M Tomita, Y Ishihama Analytical Sciences 24 (1), 161-166, 2008 | 142 | 2008 |
| Metabolomic profiling of lung and prostate tumor tissues by capillary electrophoresis time-of-flight mass spectrometry K Kami, T Fujimori, H Sato, M Sato, H Yamamoto, Y Ohashi, N Sugiyama, ... Metabolomics 9 (2), 444-453, 2013 | 132 | 2013 |
| Ser/Thr/Tyr phosphoproteome analysis of pathogenic and non‐pathogenic Pseudomonas species A Ravichandran, N Sugiyama, M Tomita, S Swarup, Y Ishihama Proteomics 9 (10), 2764-2775, 2009 | 130 | 2009 |
| Successive and selective release of phosphorylated peptides captured by hydroxy acid-modified metal oxide chromatography Y Kyono, N Sugiyama, K Imami, M Tomita, Y Ishihama Journal of proteome research 7 (10), 4585-4593, 2008 | 123 | 2008 |
| Phosphorylation of BLUS1 kinase by phototropins is a primary step in stomatal opening A Takemiya, N Sugiyama, H Fujimoto, T Tsutsumi, S Yamauchi, A Hiyama, ... Nature communications 4 (1), 1-8, 2013 | 118 | 2013 |
| mTORC1 is essential for leukemia propagation but not stem cell self-renewal T Hoshii, Y Tadokoro, K Naka, T Ooshio, T Muraguchi, N Sugiyama, ... The Journal of clinical investigation 122 (6), 2114-2129, 2012 | 117 | 2012 |
| Microscale phosphoproteome analysis of 10 000 cells from human cancer cell lines T Masuda, N Sugiyama, M Tomita, Y Ishihama Analytical chemistry 83 (20), 7698-7703, 2011 | 68 | 2011 |
| Prediction of Liquid Chromatographic Retention Times of Peptides Generated by Protease Digestion of the Escherichia coli Proteome Using Artificial Neural Networks K Shinoda, M Sugimoto, N Yachie, N Sugiyama, T Masuda, M Robert, ... Journal of proteome research 5 (12), 3312-3317, 2006 | 60 | 2006 |
| Human proteome analysis by using reversed phase monolithic silica capillary columns with enhanced sensitivity M Iwasaki, N Sugiyama, N Tanaka, Y Ishihama Journal of Chromatography A 1228, 292-297, 2012 | 57 | 2012 |
| LATS1/WARTS phosphorylates MYPT1 to counteract PLK1 and regulate mammalian mitotic progression T Chiyoda, N Sugiyama, T Shimizu, H Naoe, Y Kobayashi, J Ishizawa, ... Journal of Cell Biology 197 (5), 625-641, 2012 | 51 | 2012 |
| Integrative features of the yeast phosphoproteome and protein–protein interaction map N Yachie, R Saito, N Sugiyama, M Tomita, Y Ishihama PLoS computational biology 7 (1), e1001064, 2011 | 51 | 2011 |
| Blue light and CO 2 signals converge to regulate light-induced stomatal opening A Hiyama, A Takemiya, S Munemasa, E Okuma, N Sugiyama, Y Tada, ... Nature communications 8 (1), 1-13, 2017 | 47 | 2017 |
| Human mesenchymal stem cell-engineered hepatic cell sheets accelerate liver regeneration in mice N Itaba, Y Matsumi, K Okinaka, AA Ashla, Y Kono, M Osaki, M Morimoto, ... Scientific Reports 5 (1), 1-17, 2015 | 45 | 2015 |
