Chris Oehmen
Title
Cited by
Cited by
Year
ScalaBLAST: a scalable implementation of BLAST for high-performance data-intensive bioinformatics analysis
C Oehmen, J Nieplocha
IEEE Transactions on Parallel and Distributed Systems 17 (8), 740-749, 2006
1762006
Computational prediction of type III and IV secreted effectors in gram-negative bacteria
JE McDermott, A Corrigan, E Peterson, C Oehmen, G Niemann, ...
Infection and immunity 79 (1), 23-32, 2011
1082011
ScalaBLAST 2.0: rapid and robust BLAST calculations on multiprocessor systems
CS Oehmen, DJ Baxter
Bioinformatics 29 (6), 797-798, 2013
642013
Inhibition of dengue virus infections in cell cultures and in AG129 mice by a small interfering RNA targeting a highly conserved sequence
DA Stein, ST Perry, MD Buck, CS Oehmen, MA Fischer, E Poore, JL Smith, ...
Journal of virology 85 (19), 10154-10166, 2011
542011
A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics
BJM Webb-Robertson, WR Cannon, CS Oehmen, AR Shah, ...
Bioinformatics 24 (13), 1503-1509, 2008
542008
SVM-HUSTLE—an iterative semi-supervised machine learning approach for pairwise protein remote homology detection
AR Shah, CS Oehmen, BJ Webb-Robertson
Bioinformatics 24 (6), 783-790, 2008
542008
A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics
BJM Webb-Robertson, WR Cannon, CS Oehmen, AR Shah, ...
Bioinformatics 26 (13), 1677-1683, 2010
452010
Comparison of probability and likelihood models for peptide identification from tandem mass spectrometry data
WR Cannon, KH Jarman, BJM Webb-Robertson, DJ Baxter, CS Oehmen, ...
Journal of proteome research 4 (5), 1687-1698, 2005
362005
Biomolecular computation in virtual test tubes
MH Garzon, C Oehmen
International Workshop on DNA-Based Computers, 117-128, 2001
312001
SVM-BALSA: Remote homology detection based on Bayesian sequence alignment
BJ Webb-Robertson, C Oehmen, M Matzke
Computational Biology and Chemistry 29 (6), 440-443, 2005
302005
Physicochemical property distributions for accurate and rapid pairwise protein homology detection
BJM Webb-Robertson, KG Ratuiste, CS Oehmen
BMC bioinformatics 11 (1), 145, 2010
282010
A model of cyclic transcriptomic behavior in the cyanobacterium Cyanothece sp. ATCC 51142
JE McDermott, CS Oehmen, LA McCue, E Hill, DM Choi, J Stöckel, ...
Molecular BioSystems 7 (8), 2407-2418, 2011
252011
Mathematical Model of the Rapidly Activating Delayed Rectifier Potassium Current IKr in Rabbit Sinoatrial Node
CS Oehmen, WR Giles, SS Demir
Journal of cardiovascular electrophysiology 13 (11), 1131-1140, 2002
252002
An organic model for detecting cyber-events
C Oehmen, E Peterson, S Dowson
Proceedings of the Sixth Annual Workshop on Cyber Security and Information …, 2010
142010
Formal approach for resilient reachability based on end-system route agility
U Rauf, F Gillani, E Al-Shaer, M Halappanavar, S Chatterjee, C Oehmen
Proceedings of the 2016 ACM Workshop on Moving Target Defense, 117-127, 2016
102016
A feature vector integration approach for a generalized support vector machine pairwise homology algorithm
BJM Webb-Robertson, CS Oehmen, AR Shah
Computational biology and chemistry 32 (6), 458-461, 2008
92008
LINEBACkER: Bio-inspired data reduction toward real time network traffic analysis
J Teuton, E Peterson, D Nordwall, B Akyol, C Oehmen
2013 6th International Symposium on Resilient Control Systems (ISRCS), 170-174, 2013
72013
Evolutionary drift models for moving target defense
C Oehmen, E Peterson, J Teuton
Proceedings of the Eighth Annual Cyber Security and Information Intelligence …, 2013
72013
Directional bias and pheromone for discovery and coverage on networks
GA Fink, KS Berenhaut, CS Oehmen
2012 IEEE Sixth International Conference on Self-Adaptive and Self …, 2012
72012
Integrating subcellular location for improving machine learning models of remote homology detection in eukaryotic organisms
AR Shah, CS Oehmen, J Harper, BJM Webb-Robertson
Computational Biology and Chemistry 31 (2), 138-142, 2007
72007
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Articles 1–20