Chris Oehmen
Cited by
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ScalaBLAST: a scalable implementation of BLAST for high-performance data-intensive bioinformatics analysis
C Oehmen, J Nieplocha
IEEE Transactions on Parallel and Distributed Systems 17 (8), 740-749, 2006
Computational prediction of type III and IV secreted effectors in gram-negative bacteria
JE McDermott, A Corrigan, E Peterson, C Oehmen, G Niemann, ...
Infection and immunity 79 (1), 23-32, 2011
ScalaBLAST 2.0: rapid and robust BLAST calculations on multiprocessor systems
CS Oehmen, DJ Baxter
Bioinformatics 29 (6), 797-798, 2013
Inhibition of dengue virus infections in cell cultures and in AG129 mice by a small interfering RNA targeting a highly conserved sequence
DA Stein, ST Perry, MD Buck, CS Oehmen, MA Fischer, E Poore, JL Smith, ...
Journal of virology 85 (19), 10154-10166, 2011
A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics
BJM Webb-Robertson, WR Cannon, CS Oehmen, AR Shah, ...
Bioinformatics 24 (13), 1503-1509, 2008
SVM-HUSTLE—an iterative semi-supervised machine learning approach for pairwise protein remote homology detection
AR Shah, CS Oehmen, BJ Webb-Robertson
Bioinformatics 24 (6), 783-790, 2008
A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics
BJM Webb-Robertson, WR Cannon, CS Oehmen, AR Shah, ...
Bioinformatics 26 (13), 1677-1683, 2010
Comparison of probability and likelihood models for peptide identification from tandem mass spectrometry data
WR Cannon, KH Jarman, BJM Webb-Robertson, DJ Baxter, CS Oehmen, ...
Journal of proteome research 4 (5), 1687-1698, 2005
Biomolecular computation in virtual test tubes
MH Garzon, C Oehmen
International Workshop on DNA-Based Computers, 117-128, 2001
SVM-BALSA: Remote homology detection based on Bayesian sequence alignment
BJ Webb-Robertson, C Oehmen, M Matzke
Computational Biology and Chemistry 29 (6), 440-443, 2005
Physicochemical property distributions for accurate and rapid pairwise protein homology detection
BJM Webb-Robertson, KG Ratuiste, CS Oehmen
BMC bioinformatics 11 (1), 145, 2010
A model of cyclic transcriptomic behavior in the cyanobacterium Cyanothece sp. ATCC 51142
JE McDermott, CS Oehmen, LA McCue, E Hill, DM Choi, J Stöckel, ...
Molecular BioSystems 7 (8), 2407-2418, 2011
Mathematical Model of the Rapidly Activating Delayed Rectifier Potassium Current IKr in Rabbit Sinoatrial Node
CS Oehmen, WR Giles, SS Demir
Journal of cardiovascular electrophysiology 13 (11), 1131-1140, 2002
An organic model for detecting cyber-events
C Oehmen, E Peterson, S Dowson
Proceedings of the Sixth Annual Workshop on Cyber Security and Information …, 2010
Formal approach for resilient reachability based on end-system route agility
U Rauf, F Gillani, E Al-Shaer, M Halappanavar, S Chatterjee, C Oehmen
Proceedings of the 2016 ACM Workshop on Moving Target Defense, 117-127, 2016
A feature vector integration approach for a generalized support vector machine pairwise homology algorithm
BJM Webb-Robertson, CS Oehmen, AR Shah
Computational biology and chemistry 32 (6), 458-461, 2008
LINEBACkER: Bio-inspired data reduction toward real time network traffic analysis
J Teuton, E Peterson, D Nordwall, B Akyol, C Oehmen
2013 6th International Symposium on Resilient Control Systems (ISRCS), 170-174, 2013
Evolutionary drift models for moving target defense
C Oehmen, E Peterson, J Teuton
Proceedings of the Eighth Annual Cyber Security and Information Intelligence …, 2013
Directional bias and pheromone for discovery and coverage on networks
GA Fink, KS Berenhaut, CS Oehmen
2012 IEEE Sixth International Conference on Self-Adaptive and Self …, 2012
Integrating subcellular location for improving machine learning models of remote homology detection in eukaryotic organisms
AR Shah, CS Oehmen, J Harper, BJM Webb-Robertson
Computational Biology and Chemistry 31 (2), 138-142, 2007
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