Yucheng T. Yang
Yucheng T. Yang
Verified email at fudan.edu.cn - Homepage
Title
Cited by
Cited by
Year
Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder
MJ Gandal, P Zhang, E Hadjimichael, RL Walker, C Chen, S Liu, H Won, ...
Science 362 (6420), eaat8127, 2018
4152018
Comprehensive functional genomic resource and integrative model for the human brain
D Wang, S Liu, J Warrell, H Won, X Shi, FCP Navarro, D Clarke, M Gu, ...
Science 362 (6420), eaat8464, 2018
3652018
Recurrently deregulated lncRNAs in hepatocellular carcinoma
Y Yang, L Chen, J Gu, H Zhang, J Yuan, Q Lian, G Lv, S Wang, Y Wu, ...
Nature communications 8, 14421, 2017
1922017
CLIPdb: a CLIP-seq database for protein-RNA interactions
YT Yang, C Di, B Hu, M Zhou, Y Liu, N Song, Y Li, J Umetsu, ZJ Lu
BMC genomics 16 (1), 51, 2015
1622015
Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae
MA Freeberg, T Han, JJ Moresco, A Kong, Y Yang, ZJ Lu, JR Yates, ...
Genome biology 14 (2), R13, 2013
902013
POSTAR2: deciphering the post-transcriptional regulatory logics
Y Zhu, G Xu, YT Yang, Z Xu, X Chen, B Shi, D Xie, ZJ Lu, P Wang
Nucleic acids research 47 (D1), D203-D211, 2019
742019
POSTAR: a platform for exploring post-transcriptional regulation coordinated by RNA-binding proteins
B Hu, YT Yang, Y Huang, Y Zhu, ZJ Lu
Nucleic acids research 45 (D1), D104-D114, 2016
632016
Comprehensive analysis of long non-coding RNAs highlights their spatio-temporal expression patterns and evolutional conservation in Sus scrofa
Z Tang, Y Wu, Y Yang, YT Yang, Z Wang, J Yuan, Y Yang, C Hua, X Fan, ...
Scientific reports 7, 43166, 2017
562017
RISE: a database of RNA interactome from sequencing experiments
J Gong, D Shao, K Xu, Z Lu, ZJ Lu, YT Yang, QC Zhang
Nucleic acids research 46 (D1), D194-D201, 2017
392017
Identification of high-confidence RNA regulatory elements by combinatorial classification of RNA–protein binding sites
YE Li, M Xiao, B Shi, YT Yang, D Wang, F Wang, M Marcia, ZJ Lu
Genome biology 18 (1), 169, 2017
252017
An integrative ENCODE resource for cancer genomics
J Zhang, D Lee, V Dhiman, P Jiang, J Xu, P McGillivray, H Yang, J Liu, ...
Nature communications 11 (1), 1-11, 2020
232020
Genomic study of polyhydroxyalkanoates producing Aeromonas hydrophila 4AK4
X Gao, J Jian, WJ Li, Y Yang, XW Shen, ZR Sun, Q Wu, GQ Chen
Applied microbiology and biotechnology 97 (20), 9099-9109, 2013
212013
A common set of distinct features that characterize noncoding RNAs across multiple species
L Hu, C Di, M Kai, YT Yang, Y Li, Y Qiu, X Hu, KY Yip, MQ Zhang, ZJ Lu
Nucleic acids research 43 (1), 104-114, 2014
162014
GENCODE 2021
A Frankish, M Diekhans, I Jungreis, J Lagarde, JE Loveland, JM Mudge, ...
Nucleic acids research 49 (D1), D916-D923, 2021
112021
Global signatures of protein binding on structured RNAs in Saccharomyces cerevisiae
Y Yang, J Umetsu, ZJ Lu
Science China Life Sciences 57 (1), 22-35, 2014
112014
Large-scale mapping of mammalian transcriptomes identifies conserved genes associated with different cell states
Y Yang, YT Yang, J Yuan, ZJ Lu, JJ Li
Nucleic acids research 45 (4), 1657-1672, 2017
102017
CCG: an integrative resource of cancer protein-coding genes and long noncoding RNAs
M Liu, Y Yang, G Xu, C Tan, ZJ Lu
Discovery medicine 22 (123), 351-359, 2016
102016
Predicting changes in protein thermodynamic stability upon point mutation with deep 3D convolutional neural networks
B Li, YT Yang, JA Capra, MB Gerstein
PLoS computational biology 16 (11), e1008291, 2020
72020
Building a hybrid physical-statistical classifier for predicting the effect of variants related to protein-drug interactions
B Wang, C Yan, S Lou, P Emani, B Li, M Xu, X Kong, W Meyerson, ...
Structure 27 (9), 1469-1481. e3, 2019
52019
Predicting dynamic cellular protein–RNA interactions by deep learning using in vivo RNA structures
L Sun, K Xu, W Huang, YT Yang, P Li, L Tang, T Xiong, QC Zhang
Cell research 31 (5), 495-516, 2021
42021
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